RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, human

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA3F-208	ENST00000470737	PLA2G15	Q8NCC3	412 aa		13.93	□□□□□ -0.18
SEMA3F-208	ENST00000470737	USP7	Q93009	1102 aa		13.93	□□□□□ -0.18
SEMA3F-208	ENST00000470737	FUBP1	Q96AE4	644 aa	Known RBP	13.93	□□□□□ -0.18
SEMA3F-208	ENST00000470737	MCEE	Q96PE7	176 aa		13.93	□□□□□ -0.18
SEMA3F-208	ENST00000470737	PCDHB18P	Q96TA0	734 aa		13.93	□□□□□ -0.18
SEMA3F-208	ENST00000470737	CNPY3	Q9BT09	278 aa		13.93	□□□□□ -0.18
SEMA3F-208	ENST00000470737	TRIM4	Q9C037	500 aa		13.93	□□□□□ -0.18
SEMA3F-208	ENST00000470737	NAT10	Q9H0A0	1025 aa	Known RBP	13.93	□□□□□ -0.18
SEMA3F-208	ENST00000470737	WDR26	Q9H7D7	661 aa		13.93	□□□□□ -0.18
SEMA3F-208	ENST00000470737	SP110	Q9HB58	689 aa		13.93	□□□□□ -0.18
SEMA3F-208	ENST00000470737	CYP4F12	Q9HCS2	524 aa		13.93	□□□□□ -0.18
SEMA3F-208	ENST00000470737	FGF22	Q9HCT0	170 aa		13.93	□□□□□ -0.18
SEMA3F-208	ENST00000470737	MRPL40	Q9NQ50	206 aa	Known RBP	13.93	□□□□□ -0.18
SEMA3F-208	ENST00000470737	IL17B	Q9UHF5	180 aa		13.93	□□□□□ -0.18
SEMA3F-208	ENST00000470737	SPTA1	P02549	2419 aa		13.93	□□□□□ -0.18
SEMA3F-208	ENST00000470737		A0A1W2PQC6	194 aa		13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737		J3KR12	359 aa		13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	DAPK3	O43293	454 aa		13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	BUB1B	O60566	1050 aa	Predicted RBP	13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	HOXC4	P09017	264 aa	Predicted RBP	13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	CSNK1D	P48730	415 aa		13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	MYL5	Q02045	173 aa		13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	SRSF6	Q13247	344 aa	Known RBP	13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	ACOX1	Q15067	660 aa		13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	CAVIN1	Q6NZI2	390 aa	Known RBP	13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	LIPI	Q6XZB0	460 aa		13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	ATG14	Q6ZNE5	492 aa		13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	NYAP1	Q6ZVC0	841 aa		13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	MON1B	Q7L1V2	547 aa		13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	VASH2	Q86V25	355 aa		13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	PIM3	Q86V86	326 aa		13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	ZFAND4	Q86XD8	727 aa		13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	NEK11	Q8NG66	645 aa		13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	CELF6	Q96J87	481 aa	Known RBP	13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	TMEM168	Q9H0V1	697 aa		13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	LRRC19	Q9H756	370 aa		13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	PDF	Q9HBH1	243 aa		13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	PCDHGA4	Q9Y5G9	962 aa		13.92	□□□□□ -0.18
SEMA3F-208	ENST00000470737	RHPN2P1	A8MT19	583 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	EEF2K	O00418	725 aa	Known RBP	13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	TEX33	O43247	280 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	PPFIA2	O75334	1257 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	CPNE6	O95741	557 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	NFKBIA	P25963	317 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	ETV5	P41161	510 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	ATP1A2	P50993	1020 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	PAPOLA	P51003	745 aa	Known RBP	13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	RALGDS	Q12967	914 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	KRT31	Q15323	416 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	AMZ1	Q400G9	498 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	DPPA4	Q7L190	304 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	ZSWIM9	Q86XI8	627 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	SLITRK4	Q8IW52	837 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	TSEN2	Q8NCE0	465 aa	Known RBP	13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	ANKRD20A12P	Q8NF67	263 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	FUCA2	Q9BTY2	467 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	GSDMC	Q9BYG8	508 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	B3GNT4	Q9C0J1	378 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	PHPT1	Q9NRX4	125 aa	Predicted RBP	13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	STARD5	Q9NSY2	213 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	FOXJ2	Q9P0K8	574 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	AP4E1	Q9UPM8	1137 aa		13.91	□□□□□ -0.18
SEMA3F-208	ENST00000470737	PRSS38	A1L453	326 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	EIF3CL	B5ME19	914 aa	Known RBP	13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	STMND1	H3BQB6	276 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	DFFA	O00273	331 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	FAM87A	P0C7U9	286 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	CCNB1	P14635	433 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	ALDH4A1	P30038	563 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	TRIM23	P36406	574 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	RGR	P47804	291 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	RENBP	P51606	427 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	RPL7A	P62424	266 aa	Known RBP	13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	ILF3	Q12906	894 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	PEX6	Q13608	980 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	RFTN1	Q14699	578 aa	Predicted RBP	13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	NCAPH	Q15003	741 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	TBR1	Q16650	682 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	CLPP	Q16740	277 aa	Predicted RBP	13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	AFMID	Q63HM1	303 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	KCTD16	Q68DU8	428 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	PNCK	Q6P2M8	343 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	CCDC112	Q8NEF3	446 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	ZDHHC1	Q8WTX9	485 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	NUS1	Q96E22	293 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	EIF3C	Q99613	913 aa	Known RBP	13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	AGPAT1	Q99943	283 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	SEMA3C	Q99985	751 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	SLC39A8	Q9C0K1	460 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	SEMA6C	Q9H3T2	930 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	DHX35	Q9H5Z1	703 aa	Known RBP	13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	CARS2	Q9HA77	564 aa	Known RBP	13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	FANCL	Q9NW38	375 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	GPATCH2L	Q9NWQ4	482 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	KCTD5	Q9NXV2	234 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	LIMA1	Q9UHB6	759 aa	Known RBP	13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737	MAST4	O15021	2626 aa		13.9	□□□□□ -0.18
SEMA3F-208	ENST00000470737		A0A1W2PQ67	120 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms