RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 CDKN2AIPNLQ96HQ2 116 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 RIPOR3Q96MK2 946 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 CPNE1Q99829 537 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 CAPS2Q9BXY5 557 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 STMN4Q9H169 189 aaPredicted RBP8.35□□□□□ -1.07
GTF3A-206ENST00000470606 BPIFA1Q9NP55 256 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 KCNK9Q9NPC2 374 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 POLR3BQ9NW08 1133 aaPredicted RBP8.35□□□□□ -1.07
GTF3A-206ENST00000470606 DEC1Q9P2X7 70 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 EPS15L1Q9UBC2 864 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 SLC25A13Q9UJS0 675 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 TMEM265A0A087WTH1 108 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 A0A0J9YYE9 177 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 IQANK1A0A1B0GTG1 560 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 A0A1W2PPC1 479 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 TPP1O14773 563 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 PRPF4O43172 522 aaKnown RBP eCLIP8.35□□□□□ -1.07
GTF3A-206ENST00000470606 SLC7A4O43246 635 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 SOCS5O75159 536 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 ECI2O75521 394 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 KRT37O76014 449 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 GOT2P00505 430 aaKnown RBP8.35□□□□□ -1.07
GTF3A-206ENST00000470606 TRBC1P01850 177 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 MT-ND3P03897 115 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 LHCGRP22888 699 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 ATP5DP30049 168 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 LSP1P33241 339 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 HNF1BP35680 557 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 CCNFP41002 786 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 MTHFRP42898 656 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 ETV4P43268 484 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 MAGEA12P43365 314 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 NEK3P51956 506 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 SEC24CP53992 1094 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 GNGT1P63211 74 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 NR1H3Q13133 447 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 NAB1Q13506 487 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 PEX6Q13608 980 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 PDE1CQ14123 709 aaPredicted RBP8.35□□□□□ -1.07
GTF3A-206ENST00000470606 GRM3Q14832 879 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 CCDC85BQ15834 202 aaPredicted RBP8.35□□□□□ -1.07
GTF3A-206ENST00000470606 AAK1Q2M2I8 961 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 TXNDC11Q6PKC3 985 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 TIFABQ6ZNK6 161 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 RFLNAQ6ZTI6 216 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 TAOK1Q7L7X3 1001 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 GLT6D1Q7Z4J2 308 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 CILP2Q8IUL8 1156 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 PIANPQ8IYJ0 282 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 TERB1Q8NA31 727 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 TCP10LQ8TDR4 215 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 CDKL2Q92772 493 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 ERLEC1Q96DZ1 483 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 VPS39Q96JC1 886 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 PKNOX2Q96KN3 472 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 ADGRE3Q9BY15 652 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 CPEB1Q9BZB8 566 aaKnown RBP8.35□□□□□ -1.07
GTF3A-206ENST00000470606 MFSD1Q9H3U5 465 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 SUV39H2Q9H5I1 410 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 RABEP2Q9H5N1 569 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 ZDHHC6Q9H6R6 413 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 NLE1Q9NVX2 485 aaPredicted RBP8.35□□□□□ -1.07
GTF3A-206ENST00000470606 THG1LQ9NWX6 298 aaKnown RBP8.35□□□□□ -1.07
GTF3A-206ENST00000470606 IL17CQ9P0M4 197 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 FBXO5Q9UKT4 447 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 SARDHQ9UL12 918 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 DNAH14Q0VDD8 3507 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.34□□□□□ -1.07
GTF3A-206ENST00000470606 FAM47DPA6NHR8 397 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 C2CD4DB7Z1M9 353 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 LEFTY1O75610 366 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 RPP40O75818 363 aaKnown RBP8.34□□□□□ -1.07
GTF3A-206ENST00000470606 KRT38O76015 456 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 CLDN7O95471 211 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 ASMTLO95671 621 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 POP4O95707 220 aaKnown RBP8.34□□□□□ -1.07
GTF3A-206ENST00000470606 S1PR4O95977 384 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 KCNA5P22460 613 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 FOXN2P32314 431 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 GRIA4P48058 902 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 VASPP50552 380 aaPredicted RBP8.34□□□□□ -1.07
GTF3A-206ENST00000470606 XIAPP98170 497 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 TIAL1Q01085 375 aaKnown RBP eCLIP8.34□□□□□ -1.07
GTF3A-206ENST00000470606 ZNF234Q14588 700 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 ZNF460Q14592 562 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 POM121L1PQ3SYA9 428 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 ARSIQ5FYB1 569 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 RBM20Q5T481 1227 aaKnown RBP8.34□□□□□ -1.07
GTF3A-206ENST00000470606 C9orf64Q5T6V5 341 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 GRTP1Q5TC63 336 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 ARMC3Q5W041 872 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 GRAMD4Q6IC98 578 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 ZNF549Q6P9A3 640 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 NLRP9Q7RTR0 991 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 METTL3Q86U44 580 aaKnown RBP8.34□□□□□ -1.07
GTF3A-206ENST00000470606 CEP97Q8IW35 865 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 PLPP6Q8IY26 295 aa8.34□□□□□ -1.07
GTF3A-206ENST00000470606 PLD6Q8N2A8 252 aaKnown RBP8.34□□□□□ -1.07
GTF3A-206ENST00000470606 ZNF557Q8N988 423 aaPredicted RBP8.34□□□□□ -1.07
GTF3A-206ENST00000470606 OR6P1Q8NGX9 317 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms