RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 VAC14Q08AM6 782 aa13.32□□□□□ -0.28
CPSF4-210ENST00000469897 PTPRRQ15256 657 aa13.32□□□□□ -0.28
CPSF4-210ENST00000469897 SMTNL2Q2TAL5 461 aa13.32□□□□□ -0.28
CPSF4-210ENST00000469897 BOLA3Q53S33 107 aa13.32□□□□□ -0.28
CPSF4-210ENST00000469897 TAF1BQ53T94 588 aaPredicted RBP13.32□□□□□ -0.28
CPSF4-210ENST00000469897 TMCO4Q5TGY1 634 aa13.32□□□□□ -0.28
CPSF4-210ENST00000469897 DENND2CQ68D51 928 aa13.32□□□□□ -0.28
CPSF4-210ENST00000469897 OGFOD3Q6PK18 319 aa13.32□□□□□ -0.28
CPSF4-210ENST00000469897 POLNQ7Z5Q5 900 aa13.32□□□□□ -0.28
CPSF4-210ENST00000469897 PGBD5Q8N414 524 aa13.32□□□□□ -0.28
CPSF4-210ENST00000469897 GPR156Q8NFN8 814 aa13.32□□□□□ -0.28
CPSF4-210ENST00000469897 ZNF599Q96NL3 588 aa13.32□□□□□ -0.28
CPSF4-210ENST00000469897 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.32□□□□□ -0.28
CPSF4-210ENST00000469897 LRRN3Q9H3W5 708 aa13.32□□□□□ -0.28
CPSF4-210ENST00000469897 DPEP2Q9H4A9 486 aa13.32□□□□□ -0.28
CPSF4-210ENST00000469897 NOD2Q9HC29 1040 aa13.32□□□□□ -0.28
CPSF4-210ENST00000469897 CYP4F12Q9HCS2 524 aa13.32□□□□□ -0.28
CPSF4-210ENST00000469897 FGF22Q9HCT0 170 aa13.32□□□□□ -0.28
CPSF4-210ENST00000469897 WDR70Q9NW82 654 aa13.32□□□□□ -0.28
CPSF4-210ENST00000469897 B4GALT6Q9UBX8 382 aa13.32□□□□□ -0.28
CPSF4-210ENST00000469897 SMG1Q96Q15 3661 aaKnown RBP13.32□□□□□ -0.28
CPSF4-210ENST00000469897 ARID1BQ8NFD5 2236 aaPredicted RBP13.32□□□□□ -0.28
CPSF4-210ENST00000469897 ACACAQ13085 2346 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 PLD2O14939 933 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 MAFKO60675 156 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 SERPINC1P01008 464 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 FUCA1P04066 466 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 MYBL1P10243 752 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 HGFP14210 728 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 KELP23276 732 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 UGT1A5P35504 534 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 ARL4AP40617 200 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 INHBCP55103 352 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 KIAA1024LP59773 190 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 MAXP61244 160 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 SKOR1P84550 965 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 CFHR1Q03591 330 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 ZNF235Q14590 738 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 DPYSL2Q16555 572 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 TXNRD3NBQ6F5E7 133 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 TMCO3Q6UWJ1 677 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 RAB11FIP2Q7L804 512 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 CBARPQ8N350 705 aaPredicted RBP13.31□□□□□ -0.28
CPSF4-210ENST00000469897 ZNF843Q8N446 348 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 FBXO39Q8N4B4 442 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 OR6C4Q8NGE1 309 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 CCDC97Q96F63 343 aaPredicted RBP13.31□□□□□ -0.28
CPSF4-210ENST00000469897 BTBD6Q96KE9 485 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 COQ10AQ96MF6 247 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 CSPG4P5Q96PW8 444 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 NUDCD1Q96RS6 583 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 SUDS3Q9H7L9 328 aaPredicted RBP13.31□□□□□ -0.28
CPSF4-210ENST00000469897 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.31□□□□□ -0.28
CPSF4-210ENST00000469897 LRIT1Q9P2V4 623 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 ATXN7L1Q9ULK2 861 aaPredicted RBP13.31□□□□□ -0.28
CPSF4-210ENST00000469897 SSUH2Q9Y2M2 353 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 RNF215Q9Y6U7 377 aa13.31□□□□□ -0.28
CPSF4-210ENST00000469897 B4DGG1 531 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 ERVH48-1M5A8F1 160 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 TNFRSF10CO14798 259 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 HTRA2O43464 458 aaPredicted RBP13.3□□□□□ -0.28
CPSF4-210ENST00000469897 NOBOXO60393 691 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 ZIC2O95409 532 aaPredicted RBP13.3□□□□□ -0.28
CPSF4-210ENST00000469897 GLB1P16278 677 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 CR2P20023 1033 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 RHDQ02161 417 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 CLN3Q13286 438 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 IQCB1Q15051 598 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 CNGA3Q16281 694 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 ZSCAN23Q3MJ62 389 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 MARC1Q5VT66 337 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 CAVIN1Q6NZI2 390 aaKnown RBP13.3□□□□□ -0.28
CPSF4-210ENST00000469897 HSD11B1LQ7Z5J1 315 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 CLEC14AQ86T13 490 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 ZNF605Q86T29 641 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 CPLX3Q8WVH0 158 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 TRIM11Q96F44 468 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 LIN37Q96GY3 246 aaPredicted RBP13.3□□□□□ -0.28
CPSF4-210ENST00000469897 STRADBQ9C0K7 418 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 THAP2Q9H0W7 228 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 WDR26Q9H7D7 661 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 SPATS2LQ9NUQ6 558 aaKnown RBP13.3□□□□□ -0.28
CPSF4-210ENST00000469897 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.3□□□□□ -0.28
CPSF4-210ENST00000469897 APPL1Q9UKG1 709 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 PHTF1Q9UMS5 762 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 LOC400499M0QZD8 3231 aa13.3□□□□□ -0.28
CPSF4-210ENST00000469897 KNTC1P50748 2209 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 BAHCC1Q9P281 2608 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 A0A0U1RQS6 177 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 A0A1W2PQ67 120 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 TMX2-CTNND1H3BSU7 103 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 K7ENP7 123 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 PDE2AO00408 941 aaPredicted RBP13.29□□□□□ -0.28
CPSF4-210ENST00000469897 EFSO43281 561 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 B4GAT1O43505 415 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 HEXIM1O94992 359 aaKnown RBP13.29□□□□□ -0.28
CPSF4-210ENST00000469897 CPP00450 1065 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 CEACAM5P06731 702 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 ITGA2BP08514 1039 aa13.29□□□□□ -0.28
CPSF4-210ENST00000469897 IL4RP24394 825 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms