RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 CSF3RQ99062 836 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 SLC6A13Q9NSD5 602 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 TAS2R10Q9NYW0 307 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 INTS6Q9UL03 887 aaKnown RBP5.43□□□□□ -1.54
XRN1-207ENST00000468894 MKLN1Q9UL63 735 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 NFS1Q9Y697 457 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 CAPN7Q9Y6W3 813 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 NPIPB15A6NHN6 443 aaPredicted RBP5.42□□□□□ -1.54
XRN1-207ENST00000468894 BTBD18B2RXH4 712 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 USP17L23D6RBM5 183 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 TGFB1I1O43294 461 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 GAGE7O76087 117 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 GAGE12FP0CL80 117 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 GAGE12GP0CL81 117 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 GAGE12IP0CL82 117 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 CDAP32320 146 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 EIF3BP55884 814 aaKnown RBP5.42□□□□□ -1.54
XRN1-207ENST00000468894 COASYQ13057 564 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 GAGE1Q13065 139 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 GAGE4Q13068 117 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 G3BP1Q13283 466 aaKnown RBP eCLIP5.42□□□□□ -1.54
XRN1-207ENST00000468894 FGFBP1Q14512 234 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 COL28A1Q2UY09 1125 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 C18orf65Q6ZTR6 163 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 R3HCC1LQ7Z5L2 792 aaKnown RBP5.42□□□□□ -1.54
XRN1-207ENST00000468894 CNTROBQ8N137 903 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 CREB3L4Q8TEY5 395 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 PIP5K1AQ99755 562 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 FAM110AQ9BQ89 295 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 KCNN2Q9H2S1 579 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 DDX31Q9H8H2 851 aaKnown RBP5.42□□□□□ -1.54
XRN1-207ENST00000468894 WWOXQ9NZC7 414 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 TINAGQ9UJW2 476 aa5.42□□□□□ -1.54
XRN1-207ENST00000468894 FBXO9Q9UK97 447 aaPredicted RBP5.42□□□□□ -1.54
XRN1-207ENST00000468894 PLSCR5A0PG75 271 aa5.41□□□□□ -1.54
XRN1-207ENST00000468894 LRRC53A6NM62 1247 aa5.41□□□□□ -1.54
XRN1-207ENST00000468894 SMTNL1A8MU46 457 aa5.41□□□□□ -1.54
XRN1-207ENST00000468894 SOCS6O14544 535 aa5.41□□□□□ -1.54
XRN1-207ENST00000468894 PLRG1O43660 514 aaKnown RBP5.41□□□□□ -1.54
XRN1-207ENST00000468894 G6PDP11413 515 aa5.41□□□□□ -1.54
XRN1-207ENST00000468894 MAOAP21397 527 aa5.41□□□□□ -1.54
XRN1-207ENST00000468894 DLG1Q12959 904 aa5.41□□□□□ -1.54
XRN1-207ENST00000468894 SNTA1Q13424 505 aa5.41□□□□□ -1.54
XRN1-207ENST00000468894 OASLQ15646 514 aaKnown RBP5.41□□□□□ -1.54
XRN1-207ENST00000468894 CALCRLQ16602 461 aa5.41□□□□□ -1.54
XRN1-207ENST00000468894 ATP13A5Q4VNC0 1218 aa5.41□□□□□ -1.54
XRN1-207ENST00000468894 DCP1BQ8IZD4 617 aaKnown RBP5.41□□□□□ -1.54
XRN1-207ENST00000468894 METTL6Q8TCB7 284 aa5.41□□□□□ -1.54
XRN1-207ENST00000468894 RND1Q92730 232 aa5.41□□□□□ -1.54
XRN1-207ENST00000468894 SLC41A2Q96JW4 573 aa5.41□□□□□ -1.54
XRN1-207ENST00000468894 C1QTNF4Q9BXJ3 329 aa5.41□□□□□ -1.54
XRN1-207ENST00000468894 CNGB3Q9NQW8 809 aa5.41□□□□□ -1.54
XRN1-207ENST00000468894 RCOR1Q9UKL0 485 aa5.41□□□□□ -1.54
XRN1-207ENST00000468894 SNX9Q9Y5X1 595 aa5.41□□□□□ -1.54
XRN1-207ENST00000468894 A0A1B0GUV1 79 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 A0A1W2PPH5 198 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 TTC36A6NLP5 189 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 KDM4BO94953 1096 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 FTCDO95954 541 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 UBL4AP11441 157 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 DAOP14920 347 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 STX2P32856 288 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 RGS2P41220 211 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 RRP1P56182 461 aaKnown RBP5.4□□□□□ -1.54
XRN1-207ENST00000468894 SORDQ00796 357 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 FOXD4Q12950 439 aaPredicted RBP5.4□□□□□ -1.54
XRN1-207ENST00000468894 SLC39A14Q15043 492 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 SF3B4Q15427 424 aaKnown RBP eCLIP5.4□□□□□ -1.54
XRN1-207ENST00000468894 GSTA3Q16772 222 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 KIF19Q2TAC6 998 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 PLEKHA7Q6IQ23 1121 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 CDC73Q6P1J9 531 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 SPATA22Q8NHS9 363 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 GTF3C6Q969F1 213 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 MTBPQ96DY7 904 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 OR1F2PQ96R84 312 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 SLC26A6Q9BXS9 759 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 C17orf75Q9HAS0 396 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 SCPEP1Q9HB40 452 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 C1RLQ9NZP8 487 aa5.4□□□□□ -1.54
XRN1-207ENST00000468894 AAR2Q9Y312 384 aaKnown RBP5.4□□□□□ -1.54
XRN1-207ENST00000468894 CLDN14O95500 239 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 PMS2P2O95744 297 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 LINC00271P0C7V0 271 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 ELF1P32519 619 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 PEX5P50542 639 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 CCR9P51686 369 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 ECT2LQ008S8 904 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 EEF1A2Q05639 463 aaKnown RBP5.39□□□□□ -1.55
XRN1-207ENST00000468894 TBX2Q13207 712 aaPredicted RBP5.39□□□□□ -1.55
XRN1-207ENST00000468894 NAE1Q13564 534 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 TSTQ16762 297 aaKnown RBP5.39□□□□□ -1.55
XRN1-207ENST00000468894 SLC45A4Q5BKX6 768 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 WDR73Q6P4I2 378 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 ATF7IPQ6VMQ6 1270 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 HAPLN4Q86UW8 402 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 DSELQ8IZU8 1212 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 SMRP1Q8NCR6 262 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 PSPC1Q8WXF1 523 aaKnown RBP5.39□□□□□ -1.55
XRN1-207ENST00000468894 RFFLQ8WZ73 363 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms