RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 SLC36A4Q6YBV0 504 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 ZNF765Q7L2R6 523 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 TECPR1Q7Z6L1 1165 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 TTC7BQ86TV6 843 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 TMEM135Q86UB9 458 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 NRSN1Q8IZ57 195 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 HDDC3Q8N4P3 179 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 GPR161Q8N6U8 529 aaKnown RBP11.3□□□□□ -0.6
MSH5-214ENST00000468602 OR2T34Q8NGX1 318 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 HMGB4Q8WW32 186 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 SIGLEC10Q96LC7 697 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 COQ10AQ96MF6 247 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 LENG8Q96PV6 779 aaPredicted RBP11.3□□□□□ -0.6
MSH5-214ENST00000468602 HHIPQ96QV1 700 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 OMDQ99983 421 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 FICDQ9BVA6 458 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 BTBD1Q9H0C5 482 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 RAD18Q9NS91 495 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 BFARQ9NZS9 450 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 B4GALT6Q9UBX8 382 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 SERGEFQ9UGK8 458 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 ANAPC5Q9UJX4 755 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 SNX24Q9Y343 169 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 NUMA1Q14980 2115 aa11.3□□□□□ -0.6
MSH5-214ENST00000468602 SCN8AQ9UQD0 1980 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 CFAP54Q96N23 3096 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 FAM237BA0A1B0GVD1 139 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 A0A1W2PP55 124 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 HEATR9A2RTY3 570 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 NPIPB15A6NHN6 443 aaPredicted RBP11.29□□□□□ -0.6
MSH5-214ENST00000468602 LRRC72A6NJI9 287 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 SDR42E2A6NKP2 422 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 AGAP14A8MT82 685 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 TOR1BO14657 336 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 CTIFO43310 598 aaKnown RBP11.29□□□□□ -0.6
MSH5-214ENST00000468602 LDB2O43679 373 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 RNGTTO60942 597 aaKnown RBP11.29□□□□□ -0.6
MSH5-214ENST00000468602 CRTAMO95727 393 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 GM2AP17900 193 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 LHCGRP22888 699 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 GRIA1P42261 906 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 CHRNA4P43681 627 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 VPS41P49754 854 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 STC1P52823 247 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 EPHB1P54762 984 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 NHLH1Q02575 133 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 GUCY2DQ02846 1103 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 PTSQ03393 145 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 USP39Q53GS9 565 aaKnown RBP11.29□□□□□ -0.6
MSH5-214ENST00000468602 CFAP58Q5T655 872 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 ZNF449Q6P9G9 518 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 PDIK1LQ8N165 341 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 DENND6BQ8NEG7 585 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 LPCAT1Q8NF37 534 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 OR52K1Q8NGK4 314 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 FAM174AQ8TBP5 190 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 FBXO25Q8TCJ0 367 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 SCG3Q8WXD2 468 aaKnown RBP11.29□□□□□ -0.6
MSH5-214ENST00000468602 EID2BQ96D98 161 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 RMDN1Q96DB5 314 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 ZC3H10Q96K80 434 aaKnown RBP11.29□□□□□ -0.6
MSH5-214ENST00000468602 PLEKHG4BQ96PX9 1271 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 DUSP15Q9H1R2 295 aaPredicted RBP11.29□□□□□ -0.6
MSH5-214ENST00000468602 ANKZF1Q9H8Y5 726 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 EPB41L5Q9HCM4 733 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 TREX1Q9NSU2 369 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 POLR3BQ9NW08 1133 aaPredicted RBP11.29□□□□□ -0.6
MSH5-214ENST00000468602 ZSCAN32Q9NX65 697 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 IL17CQ9P0M4 197 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 RAB21Q9UL25 225 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 SOX13Q9UN79 622 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 PCDHGA2Q9Y5H1 932 aa11.29□□□□□ -0.6
MSH5-214ENST00000468602 ZNF106Q9H2Y7 1883 aaKnown RBP11.29□□□□□ -0.6
MSH5-214ENST00000468602 LRRK1Q38SD2 2015 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 RNASEH2AO75792 299 aaKnown RBP11.28□□□□□ -0.6
MSH5-214ENST00000468602 TTC4O95801 387 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 TSHRP16473 764 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 MCM3P25205 808 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 ZNF140P52738 457 aaPredicted RBP11.28□□□□□ -0.6
MSH5-214ENST00000468602 ARL4CP56559 192 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 RPS21P63220 83 aaKnown RBP11.28□□□□□ -0.6
MSH5-214ENST00000468602 SLC7A5Q01650 507 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 GALNT3Q14435 633 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 TRADDQ15628 312 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 CNGA3Q16281 694 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 PCSK7Q16549 785 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 HIF1AQ16665 826 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 DNAJC21Q5F1R6 531 aaKnown RBP11.28□□□□□ -0.6
MSH5-214ENST00000468602 FAM182AQ5T1J6 154 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 PDPK2PQ6A1A2 396 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.28□□□□□ -0.6
MSH5-214ENST00000468602 HORMAD1Q86X24 394 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 STYXQ8WUJ0 223 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 GAB3Q8WWW8 586 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 UBXN4Q92575 508 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 SPACA7Q96KW9 195 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 FUT8Q9BYC5 575 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 SLC6A17Q9H1V8 727 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 ZFYVE1Q9HBF4 777 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 BCCIPQ9P287 314 aaKnown RBP eCLIP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms