RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 GRIA1P42261 906 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 LIG3P49916 1009 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 ITGA8P53708 1063 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 GUCY2DQ02846 1103 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 RPL6Q02878 288 aaKnown RBP15.24■□□□□ 0.03
SNIP1-202ENST00000468040 CAV1Q03135 178 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 LAMB3Q13751 1172 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 LRRC66Q68CR7 880 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 KIAA0895LQ68EN5 471 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 ZC3H14Q6PJT7 736 aaKnown RBP15.24■□□□□ 0.03
SNIP1-202ENST00000468040 CRTC1Q6UUV9 634 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 ZNF534Q76KX8 674 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 GLT6D1Q7Z4J2 308 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 TRIM69Q86WT6 500 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 HORMAD1Q86X24 394 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 RAVER1Q8IY67 606 aaKnown RBP15.24■□□□□ 0.03
SNIP1-202ENST00000468040 FRMD1Q8N878 549 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 LRRN4CLQ8ND94 238 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 BLOC1S5Q8TDH9 187 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 SEC14L1Q92503 715 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 WRAP53Q9BUR4 548 aaKnown RBP15.24■□□□□ 0.03
SNIP1-202ENST00000468040 GPR63Q9BZJ6 419 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 ZFYVE1Q9HBF4 777 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 BFARQ9NZS9 450 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 MBD1Q9UIS9 605 aaPredicted RBP15.24■□□□□ 0.03
SNIP1-202ENST00000468040 GGT7Q9UJ14 662 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 SPO11Q9Y5K1 396 aa15.24■□□□□ 0.03
SNIP1-202ENST00000468040 A0A1W2PQU0 124 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 A8MX80 341 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 GOLGA8MH3BSY2 632 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 TM7SF2O76062 418 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 CRTAMO95727 393 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 PIRTP0C851 137 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 NUDT1P36639 197 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 NPY2RP49146 381 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 CCR5P51681 352 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 PDE1BQ01064 536 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 SEMG2Q02383 582 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 PTPRRQ15256 657 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 CNGA3Q16281 694 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 CDKN3Q16667 212 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 SPDYCQ5MJ68 293 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 ARMC3Q5W041 872 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 LIPIQ6XZB0 460 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 LPCAT2Q7L5N7 544 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 LYSMD3Q7Z3D4 306 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 TSPAN33Q86UF1 283 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 BRSK1Q8TDC3 778 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 FOXJ1Q92949 421 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 SERPINB12Q96P63 405 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 SMIM14Q96QK8 99 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 C1QTNF7Q9BXJ2 289 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 FAM129AQ9BZQ8 928 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 IL22Q9GZX6 179 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 FAM114A2Q9NRY5 505 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 PIH1D1Q9NWS0 290 aaKnown RBP15.23■□□□□ 0.03
SNIP1-202ENST00000468040 GRHL1Q9NZI5 618 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 EML5Q05BV3 1969 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 ZNF318Q5VUA4 2279 aa15.23■□□□□ 0.03
SNIP1-202ENST00000468040 C2orf81A6NN90 581 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 C10orf142B7Z368 130 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 LATO43561 262 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 LZTS3O60299 673 aaPredicted RBP15.22■□□□□ 0.03
SNIP1-202ENST00000468040 MMP20O60882 483 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 LILRB5O75023 590 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 C6P13671 934 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 TPH1P17752 444 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 BCKDHBP21953 392 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 HMGCLP35914 325 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 STC1P52823 247 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 SESN2P58004 480 aaPredicted RBP15.22■□□□□ 0.03
SNIP1-202ENST00000468040 PPP2CBP62714 309 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 PPP2CAP67775 309 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 SGCGQ13326 291 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 MSLNQ13421 630 aaPredicted RBP15.22■□□□□ 0.03
SNIP1-202ENST00000468040 POU6F1Q14863 301 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 TAF1AQ15573 450 aaPredicted RBP15.22■□□□□ 0.03
SNIP1-202ENST00000468040 ZNF284Q2VY69 593 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 TMEM259Q4ZIN3 620 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 TEX35Q5T0J7 233 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 SEL1L3Q68CR1 1132 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 TMC3Q7Z5M5 1100 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 CAND1Q86VP6 1230 aaKnown RBP15.22■□□□□ 0.03
SNIP1-202ENST00000468040 ASB12Q8WXK4 309 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 RANBP9Q96S59 729 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 C19orf43Q9BQ61 176 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 IRF2BPLQ9H1B7 796 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 DUSP15Q9H1R2 295 aaPredicted RBP15.22■□□□□ 0.03
SNIP1-202ENST00000468040 KCNH6Q9H252 994 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 C6orf106Q9H6K1 298 aaPredicted RBP15.22■□□□□ 0.03
SNIP1-202ENST00000468040 EPB41L5Q9HCM4 733 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 KCTD5Q9NXV2 234 aa15.22■□□□□ 0.03
SNIP1-202ENST00000468040 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.22■□□□□ 0.03
SNIP1-202ENST00000468040 DMGDHQ9UI17 866 aaKnown RBP15.22■□□□□ 0.03
SNIP1-202ENST00000468040 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.22■□□□□ 0.03
SNIP1-202ENST00000468040 ESYT3A0FGR9 886 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 HEATR9A2RTY3 570 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 RGSL1A5PLK6 1076 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 IGLON5A6NGN9 336 aa15.21■□□□□ 0.03
SNIP1-202ENST00000468040 METTL12A8MUP2 240 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms