RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 C7orf72A4D263 438 aa14.8□□□□□ -0.04
PRPF38B-204ENST00000467302 CPB1P15086 417 aa14.8□□□□□ -0.04
PRPF38B-204ENST00000467302 HOXC13P31276 330 aa14.8□□□□□ -0.04
PRPF38B-204ENST00000467302 CYP2C18P33260 490 aa14.8□□□□□ -0.04
PRPF38B-204ENST00000467302 GEMP55040 296 aa14.8□□□□□ -0.04
PRPF38B-204ENST00000467302 TRAP1Q12931 704 aaKnown RBP14.8□□□□□ -0.04
PRPF38B-204ENST00000467302 RANBP10Q6VN20 620 aa14.8□□□□□ -0.04
PRPF38B-204ENST00000467302 EZH1Q92800 747 aaPredicted RBP14.8□□□□□ -0.04
PRPF38B-204ENST00000467302 PCDHAC1Q9H158 963 aa14.8□□□□□ -0.04
PRPF38B-204ENST00000467302 ARHGEF38Q9NXL2 777 aa14.8□□□□□ -0.04
PRPF38B-204ENST00000467302 CD300AQ9UGN4 299 aa14.8□□□□□ -0.04
PRPF38B-204ENST00000467302 PLXNA3P51805 1871 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 PRORSD1PA6NEY8 169 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 A8MT66 165 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 PSMD12O00232 456 aaPredicted RBP14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 IPO13O94829 963 aaKnown RBP14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 ARSAP15289 507 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 PAMP19021 973 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 INHBCP55103 352 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 TXNL4AP83876 142 aaKnown RBP14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 PDAP1Q13442 181 aaKnown RBP14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 CSHL1Q14406 222 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 MAPRE2Q15555 327 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 FAM83EQ2M2I3 478 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 RBM20Q5T481 1227 aaKnown RBP14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 MANEALQ5VSG8 457 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 REP15Q6BDI9 236 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 NEPROQ6NW34 567 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 C8orf82Q6P1X6 216 aaPredicted RBP14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 PAOXQ6QHF9 649 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 KIAA0408Q6ZU52 694 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 EME1Q96AY2 570 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 SLCO4A1Q96BD0 722 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 CCDC126Q96EE4 140 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 MRGPRX2Q96LB1 330 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 UHRF1Q96T88 793 aaPredicted RBP14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 OLFM1Q99784 485 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 RNF11Q9Y3C5 154 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 VWA8A3KMH1 1905 aa14.79□□□□□ -0.04
PRPF38B-204ENST00000467302 TCRBV3S1A0A5B6 114 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 UBDO15205 165 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 IRAK2O43187 625 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 HOXA2O43364 376 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 HLA-DQB2P05538 268 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 PSMC3P17980 439 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 CHRNA4P43681 627 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 NR1H2P55055 460 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 GALNT1Q10472 559 aaPredicted RBP14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 FASTKQ14296 549 aaKnown RBP14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 GPNMBQ14956 572 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 SLC14A2Q15849 920 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 PPP1R3AQ16821 1122 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 TMEM259Q4ZIN3 620 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 BRMS1LQ5PSV4 323 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 VARS2Q5ST30 1063 aaKnown RBP14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 SCD5Q86SK9 330 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 CUZD1Q86UP6 607 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 DRAXINQ8NBI3 349 aaPredicted RBP14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 B4GALNT2Q8NHY0 566 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 LPGAT1Q92604 370 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 PPP1R2P1Q96PQ5 205 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 PRKD2Q9BZL6 878 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 SLC39A8Q9C0K1 460 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 SIK2Q9H0K1 926 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 SMOC2Q9H3U7 446 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 COQ10BQ9H8M1 238 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 EML4Q9HC35 981 aaKnown RBP14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 SPAG4Q9NPE6 437 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 PAK6Q9NQU5 681 aaPredicted RBP14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 LRFN2Q9ULH4 789 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 TMCO1Q9UM00 188 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 HEATR9A2RTY3 570 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 PMPCBO75439 489 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 ALDH2P05091 517 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 HDCP19113 662 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 SLC12A2P55011 1212 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 IKBKEQ14164 716 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 ADRM1Q16186 407 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 CTXN3Q4LDR2 81 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 AGKQ53H12 422 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 ZNF789Q5FWF6 425 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 C6orf10Q5SRN2 563 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 AGAP9Q5VTM2 703 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 CYHR1Q6ZMK1 362 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 CARM1Q86X55 608 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 SPNS2Q8IVW8 549 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 NUP93Q8N1F7 819 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 LZTR1Q8N653 840 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 LRTOMTQ8WZ04 291 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 UBXN10Q96LJ8 280 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 C8orf48Q96LL4 319 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 CYP4F12Q9HCS2 524 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 TMEM181Q9P2C4 612 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 HSFX1Q9UBD0 423 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 SFMBT1Q9UHJ3 866 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 PCDHB5Q9Y5E4 795 aa14.78□□□□□ -0.04
PRPF38B-204ENST00000467302 A0A1B0GTW7 788 aa14.77□□□□□ -0.04
PRPF38B-204ENST00000467302 A0A1W2PQH9 124 aa14.77□□□□□ -0.04
PRPF38B-204ENST00000467302 OR6C75A6NL08 312 aa14.77□□□□□ -0.04
PRPF38B-204ENST00000467302 SNRPB2P08579 225 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms