RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 DDNO94850 711 aaPredicted RBP4.24□□□□□ -1.73
SMC4-207ENST00000467263 KDM4BO94953 1096 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 SEC31AO94979 1220 aaKnown RBP4.24□□□□□ -1.73
SMC4-207ENST00000467263 MMP2P08253 660 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 CYC1P08574 325 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 IGHV4-30-4P0DP06 118 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 GPTP24298 496 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 ABCD1P33897 745 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 GAS1P54826 345 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 NEXNQ0ZGT2 675 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 DLG1Q12959 904 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 PTP4A2Q12974 167 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 SNTA1Q13424 505 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 C2orf68Q2NKX9 166 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 KIF19Q2TAC6 998 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 SPSB3Q6PJ21 355 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 MTSS1LQ765P7 747 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 SLC46A3Q7Z3Q1 461 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 ZBTB2Q8N680 514 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 AGBL3Q8NEM8 1001 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 BEST2Q8NFU1 509 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 HUS1BQ8NHY5 278 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 RND1Q92730 232 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 OR1F2PQ96R84 312 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 H2AFJQ9BTM1 129 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 ESRP2Q9H6T0 727 aaKnown RBP4.24□□□□□ -1.73
SMC4-207ENST00000467263 SLCO3A1Q9UIG8 710 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 SCINQ9Y6U3 715 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 LOC102724159A0A0B4J2E5 919 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 NTN3O00634 580 aaPredicted RBP4.23□□□□□ -1.73
SMC4-207ENST00000467263 SOCS6O14544 535 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 ZNF432O94892 652 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 CLDN14O95500 239 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 ATP1A3P13637 1013 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 DAOP14920 347 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 CD58P19256 250 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 STX2P32856 288 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 CTCFP49711 727 aaPredicted RBP4.23□□□□□ -1.73
SMC4-207ENST00000467263 SORDQ00796 357 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 PWP2Q15269 919 aaKnown RBP4.23□□□□□ -1.73
SMC4-207ENST00000467263 CALCRLQ16602 461 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 EIF2S3LQ2VIR3 472 aaKnown RBP4.23□□□□□ -1.73
SMC4-207ENST00000467263 ACAD10Q6JQN1 1059 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 ARMC8Q8IUR7 673 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 CNTROBQ8N137 903 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 CADM4Q8NFZ8 388 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 NFKBIDQ8NI38 313 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 IGSF21Q96ID5 467 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 C3orf30Q96M34 536 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 TBATAQ96M53 351 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 KXD1Q9BQD3 176 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 HAUS8Q9BT25 410 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 USP44Q9H0E7 712 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 PLEKHA4Q9H4M7 779 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 RETREG1Q9H6L5 497 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 DDX31Q9H8H2 851 aaKnown RBP4.23□□□□□ -1.73
SMC4-207ENST00000467263 UBN1Q9NPG3 1134 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 MKKSQ9NPJ1 570 aaPredicted RBP4.23□□□□□ -1.73
SMC4-207ENST00000467263 GPR108Q9NPR9 543 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 FBXO9Q9UK97 447 aaPredicted RBP4.23□□□□□ -1.73
SMC4-207ENST00000467263 STON1Q9Y6Q2 735 aa4.23□□□□□ -1.73
SMC4-207ENST00000467263 A0A1W2PQM1 296 aa4.22□□□□□ -1.73
SMC4-207ENST00000467263 DENND3A2RUS2 1198 aa4.22□□□□□ -1.73
SMC4-207ENST00000467263 TMEM202A6NGA9 273 aa4.22□□□□□ -1.73
SMC4-207ENST00000467263 PRSS47A8MTI9 375 aa4.22□□□□□ -1.73
SMC4-207ENST00000467263 PLRG1O43660 514 aaKnown RBP4.22□□□□□ -1.73
SMC4-207ENST00000467263 CREB3O43889 395 aa4.22□□□□□ -1.73
SMC4-207ENST00000467263 HARS2P49590 506 aaKnown RBP4.22□□□□□ -1.73
SMC4-207ENST00000467263 ERVFC1-1P60608 527 aa4.22□□□□□ -1.73
SMC4-207ENST00000467263 COL28A1Q2UY09 1125 aa4.22□□□□□ -1.73
SMC4-207ENST00000467263 KRTAP24-1Q3LI83 254 aa4.22□□□□□ -1.73
SMC4-207ENST00000467263 AMZ1Q400G9 498 aa4.22□□□□□ -1.73
SMC4-207ENST00000467263 WDR73Q6P4I2 378 aa4.22□□□□□ -1.73
SMC4-207ENST00000467263 QSOX2Q6ZRP7 698 aa4.22□□□□□ -1.73
SMC4-207ENST00000467263 LINGO2Q7L985 606 aa4.22□□□□□ -1.73
SMC4-207ENST00000467263 DSELQ8IZU8 1212 aa4.22□□□□□ -1.73
SMC4-207ENST00000467263 SAAL1Q96ER3 474 aa4.22□□□□□ -1.73
SMC4-207ENST00000467263 NR1H4Q96RI1 486 aaPredicted RBP4.22□□□□□ -1.73
SMC4-207ENST00000467263 KCNN2Q9H2S1 579 aa4.22□□□□□ -1.73
SMC4-207ENST00000467263 CNGB3Q9NQW8 809 aa4.22□□□□□ -1.73
SMC4-207ENST00000467263 ERRFI1Q9UJM3 462 aaPredicted RBP4.22□□□□□ -1.73
SMC4-207ENST00000467263 TINAGQ9UJW2 476 aa4.22□□□□□ -1.73
SMC4-207ENST00000467263 ICAM5Q9UMF0 924 aa4.22□□□□□ -1.73
SMC4-207ENST00000467263 ATXN2Q99700 1313 aaKnown RBP4.21□□□□□ -1.73
SMC4-207ENST00000467263 SAA2-SAA4A0A096LPE2 208 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 A0A1B0GUV1 79 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 A0A1B0GVC2 190 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 CCDC189A1A4V9 331 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 TAF4O00268 1085 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 CLGNO14967 610 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 SLC16A5O15375 505 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 GAGE7O76087 117 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 PMS2P2O95744 297 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 GAGE12FP0CL80 117 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 GAGE12GP0CL81 117 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 GAGE12IP0CL82 117 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 EPHA8P29322 1005 aaPredicted RBP4.21□□□□□ -1.74
SMC4-207ENST00000467263 CPOXP36551 454 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 BRWD1-AS2P59051 145 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 FOXD4Q12950 439 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms