RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 SUN5Q8TC36 379 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 HASPINQ8TF76 798 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 WNT8BQ93098 351 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 CELF6Q96J87 481 aaKnown RBP18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 FAR2Q96K12 515 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 SMOQ99835 787 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 CAB39LQ9H9S4 337 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 DDIT4Q9NX09 232 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 DCDC2Q9UHG0 476 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 PLXNB2O15031 1838 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 MYADML2A6NDP7 307 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 A8MU76 341 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 ZNF865P0CJ78 1059 aaPredicted RBP18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 ADSLP30566 484 aaPredicted RBP18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 SLC7A1P30825 629 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 ADRA1BP35368 520 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 PNPLA4P41247 253 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 PTK2BQ14289 1009 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 HERC3Q15034 1050 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 FAM110CQ1W6H9 321 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 SPNS2Q8IVW8 549 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 DNAAF3Q8N9W5 541 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 SPERTQ8NA61 448 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 LSM14AQ8ND56 463 aaKnown RBP18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 MFSD3Q96ES6 412 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 NOL11Q9H8H0 719 aaKnown RBP18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 GTF2IRD1Q9UHL9 959 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 RABL2BQ9UNT1 228 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 NUAK1O60285 661 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 SEC24DO94855 1032 aaPredicted RBP18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 TCN1P20061 433 aaPredicted RBP18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 ARRB2P32121 409 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 NIPAL4Q0D2K0 466 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 TRIM25Q14258 630 aaKnown RBP18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 CERCAMQ5T4B2 595 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 SMYD5Q6GMV2 418 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 ZMIZ2Q8NF64 920 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 PNPT1Q8TCS8 783 aaKnown RBP18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 AGR3Q8TD06 166 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 S100ZQ8WXG8 99 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 TP63Q9H3D4 680 aaPredicted RBP18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 TMEM216Q9P0N5 145 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 SUCOQ9UBS9 1254 aaKnown RBP18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 ZNF487B1APH4 448 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 ZBTB24O43167 697 aaPredicted RBP18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 DAB1O75553 588 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 VAPBO95292 243 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 DPP6P42658 865 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 NEDD8Q15843 81 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 CHSY3Q70JA7 882 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 AKAP14Q86UN6 197 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 ACVR1CQ8NER5 493 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 ABHD11Q8NFV4 315 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 OR13F1Q8NGS4 319 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 NT5C3BQ969T7 300 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 PPWD1Q96BP3 646 aaKnown RBP18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 DUS3LQ96G46 650 aaKnown RBP18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 PARK7Q99497 189 aaKnown RBP18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 MTG1Q9BT17 334 aaPredicted RBP18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 RNF38Q9H0F5 515 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 SMOXQ9NWM0 555 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 PCDHB12Q9Y5F1 795 aa18.11■□□□□ 0.49
SNAPC3-205ENST00000467062 A0A1W2PQ67 120 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 SLC22A1O15245 554 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 TADA2AO75478 443 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 TYK2P29597 1187 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 MAPRE1Q15691 268 aaKnown RBP18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 PGS1Q32NB8 556 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 XKR4Q5GH76 650 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 ABRAXAS1Q6UWZ7 409 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 LIMS2Q7Z4I7 341 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 CAMK1DQ8IU85 385 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 PLD6Q8N2A8 252 aaKnown RBP18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 PBXIP1Q96AQ6 731 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 NRBF2Q96F24 287 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 ADI1Q9BV57 179 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 YTHDF1Q9BYJ9 559 aaKnown RBP18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 WDR6Q9NNW5 1121 aaKnown RBP18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 C20orf96Q9NUD7 363 aaPredicted RBP18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 THG1LQ9NWX6 298 aaKnown RBP18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 STAP1Q9ULZ2 295 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 PCDHGA3Q9Y5H0 932 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 TLL2Q9Y6L7 1015 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 ZSWIM8A7E2V4 1837 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 C17orf102A2RUQ5 167 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 STX16-NPEPL1H3BU86 382 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 ALDH1A2O94788 518 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 CELF2O95319 508 aaKnown RBP18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 GNAO1P09471 354 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 SAT1P21673 171 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 WARSP23381 471 aaKnown RBP18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 PTPN3P26045 913 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 TUBA1BP68363 451 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 PRKCQQ04759 706 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 TUBA3CQ13748 450 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 ATAD3BQ5T9A4 648 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 C4orf22Q6V702 233 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 TUBA1AQ71U36 451 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 TAS2R42Q7RTR8 314 aa18.1■□□□□ 0.49
SNAPC3-205ENST00000467062 SNX31Q8N9S9 440 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms