RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 CCDC163A0A0D9SF12 145 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 BCLAF3A2AJT9 711 aaKnown RBP10.09□□□□□ -0.79
PMF1-204ENST00000466489 APOL1O14791 398 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 CLGNO14967 610 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 MTSS1O43312 755 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 KDELR3O43731 214 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 FKBP6O75344 327 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 NEBLO76041 1014 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 HAUS5O94927 633 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 ACADMP11310 421 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 ATP6V1C1P21283 382 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 AMPD1P23109 780 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 HOXA6P31267 233 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 RPA3P35244 121 aaPredicted RBP10.09□□□□□ -0.79
PMF1-204ENST00000466489 VHLP40337 213 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 SERPINH1P50454 418 aaKnown RBP10.09□□□□□ -0.79
PMF1-204ENST00000466489 WDR4P57081 412 aaKnown RBP10.09□□□□□ -0.79
PMF1-204ENST00000466489 SATB1Q01826 763 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 RAD51Q06609 339 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 GAS6Q14393 721 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 ELAVL3Q14576 367 aaKnown RBP10.09□□□□□ -0.79
PMF1-204ENST00000466489 TRIP13Q15645 432 aaPredicted RBP10.09□□□□□ -0.79
PMF1-204ENST00000466489 PTPRNQ16849 979 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 TRMT5Q32P41 509 aaKnown RBP10.09□□□□□ -0.79
PMF1-204ENST00000466489 HNRNPA1L2Q32P51 320 aaKnown RBP10.09□□□□□ -0.79
PMF1-204ENST00000466489 METTL21CQ5VZV1 264 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 KAZNQ674X7 775 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 ANO7Q6IWH7 933 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 LVRNQ6Q4G3 990 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 CLNKQ7Z7G1 428 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 C11orf74Q86VG3 221 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 RFX6Q8HWS3 928 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 ARMC2Q8NEN0 867 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 GABPB2Q8TAK5 448 aaPredicted RBP10.09□□□□□ -0.79
PMF1-204ENST00000466489 GDAP1Q8TB36 358 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 CCDC110Q8TBZ0 833 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 ACTL9Q8TC94 416 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 PPP4R1Q8TF05 950 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 HMGB4Q8WW32 186 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 STON2Q8WXE9 905 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 HMCESQ96FZ2 354 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 NAF1Q96HR8 494 aaKnown RBP10.09□□□□□ -0.79
PMF1-204ENST00000466489 RPL10LQ96L21 214 aaKnown RBP10.09□□□□□ -0.79
PMF1-204ENST00000466489 HHIPQ96QV1 700 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 NR1H4Q96RI1 486 aaPredicted RBP10.09□□□□□ -0.79
PMF1-204ENST00000466489 PAFAH2Q99487 392 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 ACE2Q9BYF1 805 aaPredicted RBP10.09□□□□□ -0.79
PMF1-204ENST00000466489 MAGEB5Q9BZ81 275 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 CEP44Q9C0F1 390 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 FAM192AQ9GZU8 254 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 NDE1Q9NXR1 346 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 STK38LQ9Y2H1 464 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 R3HDM2Q9Y2K5 976 aaKnown RBP10.09□□□□□ -0.79
PMF1-204ENST00000466489 LRCH1Q9Y2L9 728 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 OR51B4Q9Y5P0 310 aa10.09□□□□□ -0.79
PMF1-204ENST00000466489 DCLK1O15075 740 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 AXIN1O15169 862 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 ATP9BO43861 1147 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 SNAP91O60641 907 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 ADAM23O75077 832 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 ZNF217O75362 1048 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 GCATO75600 419 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 RBP3P10745 1247 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 TPSB2P20231 275 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 PRKCHP24723 683 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 CNR2P34972 360 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 FDFT1P37268 417 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 GARSP41250 739 aaKnown RBP10.08□□□□□ -0.8
PMF1-204ENST00000466489 CTSOP43234 321 aaPredicted RBP10.08□□□□□ -0.8
PMF1-204ENST00000466489 VPS41P49754 854 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 STK19P49842 368 aaPredicted RBP10.08□□□□□ -0.8
PMF1-204ENST00000466489 SNRPD1P62314 119 aaKnown RBP10.08□□□□□ -0.8
PMF1-204ENST00000466489 OTUD4Q01804 1114 aaKnown RBP10.08□□□□□ -0.8
PMF1-204ENST00000466489 KLC1Q07866 573 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 WASHC5Q12768 1159 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 ASPHQ12797 758 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 MMRN1Q13201 1228 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 SERINC3Q13530 473 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 CAMK2GQ13555 558 aaPredicted RBP10.08□□□□□ -0.8
PMF1-204ENST00000466489 ENPP2Q13822 863 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 FRG1Q14331 258 aaKnown RBP10.08□□□□□ -0.8
PMF1-204ENST00000466489 RFTN1Q14699 578 aaPredicted RBP10.08□□□□□ -0.8
PMF1-204ENST00000466489 TAF11Q15544 211 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 TPSAB1Q15661 275 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 ATP13A4Q4VNC1 1196 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 USP39Q53GS9 565 aaKnown RBP10.08□□□□□ -0.8
PMF1-204ENST00000466489 ANKRD20A2Q5SQ80 823 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 ANKRD20A1Q5TYW2 823 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 ZNF776Q68DI1 518 aaPredicted RBP10.08□□□□□ -0.8
PMF1-204ENST00000466489 CAPRIN2Q6IMN6 1127 aaKnown RBP10.08□□□□□ -0.8
PMF1-204ENST00000466489 TIGD7Q6NT04 549 aaPredicted RBP10.08□□□□□ -0.8
PMF1-204ENST00000466489 IRGCQ6NXR0 463 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 PKN3Q6P5Z2 889 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 AAGABQ6PD74 315 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 KIAA1324Q6UXG2 1013 aaKnown RBP10.08□□□□□ -0.8
PMF1-204ENST00000466489 NLRP9Q7RTR0 991 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 LONP2Q86WA8 852 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 PCDH20Q8N6Y1 951 aaKnown RBP10.08□□□□□ -0.8
PMF1-204ENST00000466489 OR52K2Q8NGK3 314 aa10.08□□□□□ -0.8
PMF1-204ENST00000466489 OR2T3Q8NH03 318 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms