RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 NRF1Q16656 503 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 MS4A13Q5J8X5 152 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 ZNF678Q5SXM1 525 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 LARP4Q71RC2 724 aaKnown RBP eCLIP19.41■□□□□ 0.7
LIMS2-212ENST00000466410 AHI1Q8N157 1196 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 METTL25Q8N6Q8 603 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 OR52K2Q8NGK3 314 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 LRTOMTQ8WZ04 291 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 EME1Q96AY2 570 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 SLC39A3Q9BRY0 314 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 ZCWPW1Q9H0M4 648 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 SP110Q9HB58 689 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 VCX3AQ9NNX9 186 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 SPAG4Q9NPE6 437 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 SLC4A1P02730 911 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 RHOQP17081 205 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 ETFBP38117 255 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 TBX4P57082 545 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 RHDQ02161 417 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 DSC3Q14574 896 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 SLC5A9Q2M3M2 681 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 UNC50Q53HI1 259 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 CYP2R1Q6VVX0 501 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 PGBD5Q8N414 524 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 EXT2Q93063 718 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 SLCO4A1Q96BD0 722 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 TBATAQ96M53 351 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 PRPF18Q99633 342 aaKnown RBP19.41■□□□□ 0.7
LIMS2-212ENST00000466410 ZYG11BQ9C0D3 744 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 CD300AQ9UGN4 299 aa19.41■□□□□ 0.7
LIMS2-212ENST00000466410 A0A1B0GVG6 124 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 C7orf72A4D263 438 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 LDB2O43679 373 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 NRP2O60462 931 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 TNFAIP8O95379 198 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 HSPA13P48723 471 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 PTPRCAPQ14761 206 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 IL31Q6EBC2 164 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 GALNT7Q86SF2 657 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 ARRDC2Q8TBH0 407 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 SLC25A23Q9BV35 468 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 ZNF696Q9H7X3 374 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 MRPL40Q9NQ50 206 aaKnown RBP19.4■□□□□ 0.7
LIMS2-212ENST00000466410 RGS18Q9NS28 235 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 MRGBPQ9NV56 204 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 TMEM248Q9NWD8 314 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 NDUFA13Q9P0J0 144 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 FNIP2Q9P278 1114 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 GMPR2Q9P2T1 348 aaKnown RBP19.4■□□□□ 0.7
LIMS2-212ENST00000466410 KPNA6O60684 536 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 ALDOCP09972 364 aaKnown RBP19.4■□□□□ 0.7
LIMS2-212ENST00000466410 ATXN1LP0C7T5 689 aaKnown RBP19.4■□□□□ 0.7
LIMS2-212ENST00000466410 TYMPP19971 482 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 USP46P62068 366 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 NADK2Q4G0N4 442 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 RBM44Q6ZP01 1051 aaKnown RBP19.4■□□□□ 0.7
LIMS2-212ENST00000466410 MON1AQ86VX9 555 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 DGCR14Q96DF8 476 aaKnown RBP19.4■□□□□ 0.7
LIMS2-212ENST00000466410 L3HYPDHQ96EM0 354 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 TRMOQ9BU70 441 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 COQ10BQ9H8M1 238 aa19.4■□□□□ 0.7
LIMS2-212ENST00000466410 PPP6CO00743 305 aa19.39■□□□□ 0.7
LIMS2-212ENST00000466410 VILLO15195 856 aa19.39■□□□□ 0.7
LIMS2-212ENST00000466410 TRPA1O75762 1119 aa19.39■□□□□ 0.7
LIMS2-212ENST00000466410 TBX18O95935 607 aa19.39■□□□□ 0.7
LIMS2-212ENST00000466410 FAM58BPP0C7Q3 252 aa19.39■□□□□ 0.7
LIMS2-212ENST00000466410 FGFR3P22607 806 aa19.39■□□□□ 0.7
LIMS2-212ENST00000466410 DYNC1I2Q13409 638 aaKnown RBP19.39■□□□□ 0.7
LIMS2-212ENST00000466410 LPIN1Q14693 890 aa19.39■□□□□ 0.7
LIMS2-212ENST00000466410 UGT3A2Q3SY77 523 aa19.39■□□□□ 0.7
LIMS2-212ENST00000466410 PITRM1Q5JRX3 1037 aa19.39■□□□□ 0.7
LIMS2-212ENST00000466410 C6orf10Q5SRN2 563 aa19.39■□□□□ 0.7
LIMS2-212ENST00000466410 ZNF549Q6P9A3 640 aa19.39■□□□□ 0.7
LIMS2-212ENST00000466410 FUNDC1Q8IVP5 155 aa19.39■□□□□ 0.7
LIMS2-212ENST00000466410 RYBPQ8N488 228 aaPredicted RBP19.39■□□□□ 0.7
LIMS2-212ENST00000466410 IGSF8Q969P0 613 aa19.39■□□□□ 0.7
LIMS2-212ENST00000466410 C19orf60Q96EN9 201 aa19.39■□□□□ 0.7
LIMS2-212ENST00000466410 SLC2A11Q9BYW1 496 aa19.39■□□□□ 0.7
LIMS2-212ENST00000466410 GRIP2Q9C0E4 1043 aa19.39■□□□□ 0.7
LIMS2-212ENST00000466410 POLR3BQ9NW08 1133 aaPredicted RBP19.39■□□□□ 0.7
LIMS2-212ENST00000466410 CROTQ9UKG9 612 aa19.39■□□□□ 0.7
LIMS2-212ENST00000466410 SCML2Q9UQR0 700 aa19.39■□□□□ 0.7
LIMS2-212ENST00000466410 RTN3O95197 1032 aaPredicted RBP19.39■□□□□ 0.69
LIMS2-212ENST00000466410 SPATA31D3P0C874 917 aa19.39■□□□□ 0.69
LIMS2-212ENST00000466410 GRK4P32298 578 aa19.39■□□□□ 0.69
LIMS2-212ENST00000466410 HUNKP57058 714 aa19.39■□□□□ 0.69
LIMS2-212ENST00000466410 SH3BP2P78314 561 aa19.39■□□□□ 0.69
LIMS2-212ENST00000466410 EFEMP1Q12805 493 aa19.39■□□□□ 0.69
LIMS2-212ENST00000466410 SPATA31D4Q6ZUB0 917 aa19.39■□□□□ 0.69
LIMS2-212ENST00000466410 CIR1Q86X95 450 aaPredicted RBP19.39■□□□□ 0.69
LIMS2-212ENST00000466410 TOP1MTQ969P6 601 aa19.39■□□□□ 0.69
LIMS2-212ENST00000466410 GMIPQ9P107 970 aa19.39■□□□□ 0.69
LIMS2-212ENST00000466410 TMEM181Q9P2C4 612 aa19.39■□□□□ 0.69
LIMS2-212ENST00000466410 CNOT11Q9UKZ1 510 aaKnown RBP19.39■□□□□ 0.69
LIMS2-212ENST00000466410 PTGDR2Q9Y5Y4 395 aa19.39■□□□□ 0.69
LIMS2-212ENST00000466410 LRRC14BA6NHZ5 514 aa19.39■□□□□ 0.69
LIMS2-212ENST00000466410 SIX3O95343 332 aaPredicted RBP19.39■□□□□ 0.69
LIMS2-212ENST00000466410 HERVK_113P63132 956 aa19.39■□□□□ 0.69
LIMS2-212ENST00000466410 TIAL1Q01085 375 aaKnown RBP eCLIP19.39■□□□□ 0.69
LIMS2-212ENST00000466410 ARMC3Q5W041 872 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms