RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 SOCS5O75159 536 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 SLC4A1P02730 911 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 PDHA1P08559 390 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 ADRB1P08588 477 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 CYP2A6P11509 494 aaPredicted RBP9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 CASQ1P31415 396 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 CD86P42081 329 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 RABIFP47224 123 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 POLR2LP62875 67 aaKnown RBP9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 NIPAL4Q0D2K0 466 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 ZNF211Q13398 564 aaPredicted RBP9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 ARHGEF7Q14155 803 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 TFDP2Q14188 446 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 PDK1Q15118 436 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 TRIP6Q15654 476 aaKnown RBP9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 CNGA3Q16281 694 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 PCSK7Q16549 785 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 INAVAQ3KP66 663 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 ARMC12Q5T9G4 340 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 PEX26Q7Z412 305 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 KDELC2Q7Z4H8 507 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 ABI3BPQ7Z7G0 1075 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 TSPAN33Q86UF1 283 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 IQCHQ86VS3 1027 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 LRRC49Q8IUZ0 686 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 KATNAL2Q8IYT4 538 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 OXR1Q8N573 874 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 TEX26Q8N6G2 289 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 EID2Q8N6I1 236 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 DENND6BQ8NEG7 585 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 LPCAT1Q8NF37 534 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 UBXN4Q92575 508 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 ECHDC3Q96DC8 303 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 TSGA13Q96PP4 275 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 FAM118BQ9BPY3 351 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 C1QTNF7Q9BXJ2 289 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 C1QTNF2Q9BXJ5 285 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 SUDS3Q9H7L9 328 aaPredicted RBP9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 HAUS2Q9NVX0 235 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 TRMT1Q9NXH9 659 aaKnown RBP9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 AMFRQ9UKV5 643 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 GUCA1BQ9UMX6 200 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 PPP2R2CQ9Y2T4 447 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 CAPN6Q9Y6Q1 641 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 MYLKQ15746 1914 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 COL5A1P20908 1838 aaPredicted RBP9.77□□□□□ -0.84
RTFDC1-205ENST00000466260 ZNF487B1APH4 448 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 HTRA2O43464 458 aaPredicted RBP9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 RECQL5O94762 991 aaPredicted RBP9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 PGLSO95336 258 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 FTH1P19P0C7X4 201 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 ZNF883P0CG24 379 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 TGM2P21980 687 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 CTNNA2P26232 953 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 VIPR1P32241 457 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 CTNNA1P35221 906 aaKnown RBP9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 GRK6P43250 576 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 SUOXP51687 545 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 OVGP1Q12889 678 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 GALNT3Q14435 633 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 LRRC14Q15048 493 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 WSCD2Q2TBF2 565 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 LIPIQ6XZB0 460 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 USP45Q70EL2 814 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 DPPA4Q7L190 304 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 RD3Q7Z3Z2 195 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 VSIG1Q86XK7 387 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 RCOR2Q8IZ40 523 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 RBFAQ8N0V3 343 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 TTC13Q8NBP0 860 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 PLA2G15Q8NCC3 412 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 EXD1Q8NHP7 514 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 HCAR2Q8TDS4 363 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 TFB1MQ8WVM0 346 aaKnown RBP9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 P3H4Q92791 437 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 OLFM3Q96PB7 478 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 RBM15Q96T37 977 aaKnown RBP eCLIP9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 HERPUD2Q9BSE4 406 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 TDRD1Q9BXT4 1180 aaKnown RBP9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 C10orf88Q9H8K7 445 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 UCKL1Q9NWZ5 548 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 KLHL8Q9P2G9 620 aaPredicted RBP9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 FTSJ1Q9UET6 329 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 CD84Q9UIB8 345 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 MOSPD1Q9UJG1 213 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 PHTF1Q9UMS5 762 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 OR1A2Q9Y585 309 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 PCDHA3Q9Y5H8 950 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 HS3ST3A1Q9Y663 406 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 WDR87Q6ZQQ6 2873 aa9.77□□□□□ -0.85
RTFDC1-205ENST00000466260 ZFC3H1O60293 1989 aaKnown RBP9.76□□□□□ -0.85
RTFDC1-205ENST00000466260 A0A1W2PQ67 120 aa9.76□□□□□ -0.85
RTFDC1-205ENST00000466260 CCDC66A2RUB6 948 aa9.76□□□□□ -0.85
RTFDC1-205ENST00000466260 NPIPB15A6NHN6 443 aaPredicted RBP9.76□□□□□ -0.85
RTFDC1-205ENST00000466260 BTNL10A8MVZ5 291 aa9.76□□□□□ -0.85
RTFDC1-205ENST00000466260 H3BM21 787 aa9.76□□□□□ -0.85
RTFDC1-205ENST00000466260 H7C0C1 242 aa9.76□□□□□ -0.85
RTFDC1-205ENST00000466260 YKT6O15498 198 aa9.76□□□□□ -0.85
RTFDC1-205ENST00000466260 HYAL3O43820 417 aaPredicted RBP9.76□□□□□ -0.85
RTFDC1-205ENST00000466260 PCDHGA12O60330 932 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms