RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ACADMP11310 421 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 GM2AP17900 193 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 PSMA3P25788 255 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 MGAT1P26572 445 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 TNNT3P45378 269 aaPredicted RBP11.17□□□□□ -0.62
VCP-204ENST00000466100 PXNP49023 591 aaPredicted RBP11.17□□□□□ -0.62
VCP-204ENST00000466100 NPY2RP49146 381 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 ZNF140P52738 457 aaPredicted RBP11.17□□□□□ -0.62
VCP-204ENST00000466100 ARL4CP56559 192 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 SESN2P58004 480 aaPredicted RBP11.17□□□□□ -0.62
VCP-204ENST00000466100 CRADDP78560 199 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 SEMG2Q02383 582 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 DHX9Q08211 1270 aaKnown RBP11.17□□□□□ -0.62
VCP-204ENST00000466100 DMWDQ09019 674 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 POU6F1Q14863 301 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 ELF2Q15723 593 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 CNGA3Q16281 694 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 MAP7D1Q3KQU3 841 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 TMEM52BQ4KMG9 183 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 TMEM31Q5JXX7 168 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 ARMC3Q5W041 872 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 FBXL19Q6PCT2 694 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 CRTC1Q6UUV9 634 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.17□□□□□ -0.62
VCP-204ENST00000466100 LYSMD3Q7Z3D4 306 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 TTC7BQ86TV6 843 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 C1orf210Q8IVY1 113 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 GSPT2Q8IYD1 628 aaKnown RBP11.17□□□□□ -0.62
VCP-204ENST00000466100 DNAAF3Q8N9W5 541 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 DTWD2Q8NBA8 298 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 BRSK1Q8TDC3 778 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 FMO2Q99518 471 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 OMDQ99983 421 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 IL22Q9GZX6 179 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 TRABDQ9H4I3 376 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 PLAC1Q9HBJ0 212 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 HACD3Q9P035 362 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 BCCIPQ9P287 314 aaKnown RBP eCLIP11.17□□□□□ -0.62
VCP-204ENST00000466100 TEX264Q9Y6I9 313 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 GON4LQ3T8J9 2241 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 THADAQ6YHU6 1953 aa11.17□□□□□ -0.62
VCP-204ENST00000466100 TP53BP1Q12888 1972 aaPredicted RBP11.16□□□□□ -0.62
VCP-204ENST00000466100 IGHV1OR15-9A0A0B4J2B8 117 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 CCDC163A0A0D9SF12 145 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 FAM86C2PA6NEL3 165 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 H0Y858 1186 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 EIF3HO15372 352 aaKnown RBP eCLIP11.16□□□□□ -0.62
VCP-204ENST00000466100 C1SP09871 688 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 CYP2A6P11509 494 aaPredicted RBP11.16□□□□□ -0.62
VCP-204ENST00000466100 XPAP23025 273 aaPredicted RBP11.16□□□□□ -0.62
VCP-204ENST00000466100 ACSL1P33121 698 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 STC1P52823 247 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 FAM193AP78312 1265 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 CREB5Q02930 508 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 PTSQ03393 145 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 ELP6Q0PNE2 266 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 SFSWAPQ12872 951 aaKnown RBP11.16□□□□□ -0.62
VCP-204ENST00000466100 HLTFQ14527 1009 aaKnown RBP eCLIP11.16□□□□□ -0.62
VCP-204ENST00000466100 FASTKD3Q14CZ7 662 aaKnown RBP11.16□□□□□ -0.62
VCP-204ENST00000466100 TAF1AQ15573 450 aaPredicted RBP11.16□□□□□ -0.62
VCP-204ENST00000466100 BBS9Q3SYG4 887 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 TMEM259Q4ZIN3 620 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 CCDC38Q502W7 563 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 LRRC66Q68CR7 880 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 ERAP2Q6P179 960 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 TSSK4Q6SA08 328 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 LIPIQ6XZB0 460 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 CCNI2Q6ZMN8 369 aaPredicted RBP11.16□□□□□ -0.62
VCP-204ENST00000466100 GLT6D1Q7Z4J2 308 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 TMC3Q7Z5M5 1100 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 IGDCC3Q8IVU1 814 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 PDIK1LQ8N165 341 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 NDUFAF2Q8N183 169 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 PAF1Q8N7H5 531 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 BLOC1S5Q8TDH9 187 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 PTCD2Q8WV60 388 aaKnown RBP11.16□□□□□ -0.62
VCP-204ENST00000466100 NELL1Q92832 810 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 LRRC39Q96DD0 335 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 ZNF778Q96MU6 729 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 SRPK1Q96SB4 655 aaKnown RBP11.16□□□□□ -0.62
VCP-204ENST00000466100 TRIM56Q9BRZ2 755 aaKnown RBP11.16□□□□□ -0.62
VCP-204ENST00000466100 KIFC1Q9BW19 673 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 PARD6BQ9BYG5 372 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 TXLNGYQ9BZA5 131 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 TPSD1Q9BZJ3 242 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 MRM3Q9HC36 420 aaKnown RBP11.16□□□□□ -0.62
VCP-204ENST00000466100 PREBQ9HCU5 417 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.16□□□□□ -0.62
VCP-204ENST00000466100 BFARQ9NZS9 450 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 SOX13Q9UN79 622 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 TCAF1Q9Y4C2 921 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 KCTD3Q9Y597 815 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 ARL5AQ9Y689 179 aa11.16□□□□□ -0.62
VCP-204ENST00000466100 MUC6Q6W4X9 2439 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 C1orf232A0A0U1RR37 186 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 HEATR9A2RTY3 570 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 SDR42E2A6NKP2 422 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 AXIN1O15169 862 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 LAMTOR5O43504 91 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 TSPAN6O43657 245 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms