RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 SLC5A9Q2M3M2 681 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 ANO4Q32M45 955 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 ALFQ53S48 1182 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 INO80DQ53TQ3 878 aaPredicted RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 RAP1GAP2Q684P5 730 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 CES5AQ6NT32 575 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 HIBCHQ6NVY1 386 aaPredicted RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 GALNT18Q6P9A2 607 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 C1orf228Q6PIY5 440 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 NPNTQ6UXI9 565 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 LCNL1Q6ZST4 164 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 GSTA5Q7RTV2 222 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 KIAA0907Q7Z7F0 614 aaPredicted RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 RBM23Q86U06 439 aaKnown RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 CHSY1Q86X52 802 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 DENND1CQ8IV53 801 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 ARID3BQ8IVW6 561 aaPredicted RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 CCDC13Q8IYE1 715 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 ADGRG2Q8IZP9 1017 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 MREGQ8N565 214 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 NPWQ8N729 165 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 HJURPQ8NCD3 748 aaPredicted RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 MCUQ8NE86 351 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 FIBINQ8TAL6 211 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 SH3RF2Q8TEC5 729 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 AENQ8WTP8 325 aaKnown RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 CASKIN2Q8WXE0 1202 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 ATG4AQ8WYN0 398 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 ARHGEF2Q92974 986 aaKnown RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 USP13Q92995 863 aaPredicted RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 WBP2Q969T9 261 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 PABPC5Q96DU9 382 aaKnown RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 TCEAL4Q96EI5 215 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 P2RY11Q96G91 374 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 SNF8Q96H20 258 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 RCC1LQ96I51 464 aaKnown RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 MSLNLQ96KJ4 702 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 TEKT5Q96M29 485 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 NECTIN4Q96NY8 510 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 RPRD1AQ96P16 312 aaPredicted RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 PNKPQ96T60 521 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 RHOXF2Q9BQY4 288 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 TMEM121Q9BTD3 319 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 SLC2A11Q9BYW1 496 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 SLC39A8Q9C0K1 460 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 TRPC7Q9HCX4 862 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 EIF2B3Q9NR50 452 aaKnown RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 ZDHHC18Q9NUE0 388 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 HCFC1R1Q9NWW0 138 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 GRHL1Q9NZI5 618 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 SAE1Q9UBE0 346 aaPredicted RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 FBXO10Q9UK96 956 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 CDH7Q9ULB5 785 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 SNX24Q9Y343 169 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 SF3B6Q9Y3B4 125 aaKnown RBP5.58□□□□□ -1.52
VPS41-211ENST00000466017 HEY1Q9Y5J3 304 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 OR51B4Q9Y5P0 310 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 SNX10Q9Y5X0 201 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 DOCK6Q96HP0 2047 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 ADAMTS20P59510 1910 aa5.58□□□□□ -1.52
VPS41-211ENST00000466017 MKI67P46013 3256 aaKnown RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 ATG2AQ2TAZ0 1938 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 TYW5A2RUC4 315 aaKnown RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 ERI2A8K979 691 aaKnown RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 NUDT19A8MXV4 375 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 RASA4BC9J798 803 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 E7ESA3 106 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 SGK1O00141 431 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 AP3B1O00203 1094 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 KCNN4O15554 427 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 RASA4O43374 803 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 KLF4O43474 513 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 KDELR3O43731 214 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 PRAMEF11O60813 436 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 RAMP2O60895 175 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 PPM1BO75688 479 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 CNTN5O94779 1100 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 STK10O94804 968 aaKnown RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 SUN1O94901 812 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 TSPAN15O95858 294 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 MOCS2O96007 188 aaPredicted RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 PEX11BO96011 259 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 PENKP01210 267 aaPredicted RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 CAPNS1P04632 268 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 CYBBP04839 570 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 HMBSP08397 361 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 MED14OSP0DP75 135 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 MLNP12872 115 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 TSHRP16473 764 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 GJA1P17302 382 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 TPSB2P20231 275 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 OR1E1P30953 314 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 LTBRP36941 435 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 ADCY8P40145 1251 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 RPL21P46778 160 aaKnown RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 PAPOLAP51003 745 aaKnown RBP5.57□□□□□ -1.52
VPS41-211ENST00000466017 RENBPP51606 427 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 ERVFRD-1P60508 538 aa5.57□□□□□ -1.52
VPS41-211ENST00000466017 YBX1P67809 324 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms