RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 EI24O14681 340 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 ARPC2O15144 300 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 FOXD2O60548 495 aaPredicted RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 E2F6O75461 281 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 CLPXO76031 633 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 SEC24DO94855 1032 aaPredicted RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 MATN4O95460 622 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 BCL10O95999 233 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 LTA4HP09960 611 aaKnown RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 ALDOCP09972 364 aaKnown RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 MBL2P11226 248 aaPredicted RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 ARSAP15289 507 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 PAMP19021 973 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 KCNA5P22460 613 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 MAP4P27816 1152 aaKnown RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 CLCN5P51795 746 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 GJA9P57773 515 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 TNK2Q07912 1038 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 CTBP1Q13363 440 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 ATP1A4Q13733 1029 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 CBX2Q14781 532 aaPredicted RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 PITRM1Q5JRX3 1037 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 NOL9Q5SY16 702 aaKnown RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 FAM72AQ5TYM5 149 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 C9orf57Q5W0N0 161 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 EGFLAMQ63HQ2 1017 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 FAM72DQ6L9T8 149 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 CYHR1Q6ZMK1 362 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 LIMS2Q7Z4I7 341 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 FAM72BQ86X60 149 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 PTRH1Q86Y79 214 aaKnown RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 SPPL2CQ8IUH8 684 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 DDIASQ8IXT1 998 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 TBC1D21Q8IYX1 336 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 SFRP1Q8N474 314 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 SLC15A4Q8N697 577 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 MINDY2Q8NBR6 621 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 OR9I1Q8NGQ6 314 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 TSPEARQ8WU66 669 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 OSCP1Q8WVF1 389 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 HDAC10Q969S8 669 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 C19orf60Q96EN9 201 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 NRBF2Q96F24 287 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 TSPAN17Q96FV3 270 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 SLC39A3Q9BRY0 314 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 DUSP16Q9BY84 665 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 NAA50Q9GZZ1 169 aaKnown RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 WDR6Q9NNW5 1121 aaKnown RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 TREX1Q9NSU2 369 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 CMTM6Q9NX76 183 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 GDAP2Q9NXN4 497 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 ERAP1Q9NZ08 941 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 GMIPQ9P107 970 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 IFT80Q9P2H3 777 aaPredicted RBP7.32□□□□□ -1.24
USP48-206ENST00000464577 PSME2Q9UL46 239 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 DOLKQ9UPQ8 538 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 FIS1Q9Y3D6 152 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 COL1A2P08123 1366 aa7.32□□□□□ -1.24
USP48-206ENST00000464577 SYNJ2BP-COX16A0A087WUM0 186 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 FAM149AA5PLN7 773 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 NR5A2O00482 541 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 ANGPT2O15123 496 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 XPOTO43592 962 aaKnown RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 HCRTO43612 131 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 ANXA9O76027 345 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 EGFRP00533 1210 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 JCHAINP01591 159 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 IMPDH1P20839 514 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 SLC6A2P23975 617 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 RPS12P25398 132 aaKnown RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 YWHAQP27348 245 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 TKTP29401 623 aaKnown RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 HOXD12P35452 270 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 SCN1AP35498 2009 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 SLC26A3P40879 764 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 MRPL19P49406 292 aaKnown RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 IGBP1P78318 339 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 NFKB2Q00653 900 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 TRAF2Q12933 501 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 NME3Q13232 169 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 CSHL1Q14406 222 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 ACAP2Q15057 778 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 NEDD8Q15843 81 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 BCL2A1Q16548 175 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 BROXQ5VW32 411 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 SYPL2Q5VXT5 272 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 LINC00299Q6ZSB3 139 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 FRA10AC1Q70Z53 315 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 GALNT7Q86SF2 657 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 ZC3H7AQ8IWR0 971 aaKnown RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 MIER2Q8N344 545 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 SPATA6LQ8N4H0 392 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 TTC30BQ8N4P2 665 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 PGAP3Q96FM1 320 aaPredicted RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 TNIP3Q96KP6 325 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 ZNF560Q96MR9 790 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 ZMAT2Q96NC0 199 aaKnown RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 ASB2Q96Q27 587 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 FCRL5Q96RD9 977 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 MROQ9BYG7 248 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms