RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 NSUN2Q08J23 767 aaKnown RBP eCLIP14.55□□□□□ -0.08
ALMS1-202ENST00000464408 IQCB1Q15051 598 aa14.55□□□□□ -0.08
ALMS1-202ENST00000464408 ACOX1Q15067 660 aa14.55□□□□□ -0.08
ALMS1-202ENST00000464408 CNGA3Q16281 694 aa14.55□□□□□ -0.08
ALMS1-202ENST00000464408 DPYSL2Q16555 572 aa14.55□□□□□ -0.08
ALMS1-202ENST00000464408 TMCO4Q5TGY1 634 aa14.55□□□□□ -0.08
ALMS1-202ENST00000464408 HGSNATQ68CP4 663 aa14.55□□□□□ -0.08
ALMS1-202ENST00000464408 CAVIN1Q6NZI2 390 aaKnown RBP14.55□□□□□ -0.08
ALMS1-202ENST00000464408 LVRNQ6Q4G3 990 aa14.55□□□□□ -0.08
ALMS1-202ENST00000464408 POLNQ7Z5Q5 900 aa14.55□□□□□ -0.08
ALMS1-202ENST00000464408 PAF1Q8N7H5 531 aa14.55□□□□□ -0.08
ALMS1-202ENST00000464408 Q8N9G6 341 aaPredicted RBP14.55□□□□□ -0.08
ALMS1-202ENST00000464408 GPR156Q8NFN8 814 aa14.55□□□□□ -0.08
ALMS1-202ENST00000464408 OR56A4Q8NGH8 313 aa14.55□□□□□ -0.08
ALMS1-202ENST00000464408 WDR36Q8NI36 951 aaKnown RBP14.55□□□□□ -0.08
ALMS1-202ENST00000464408 PTCD2Q8WV60 388 aaKnown RBP14.55□□□□□ -0.08
ALMS1-202ENST00000464408 TMEM168Q9H0V1 697 aa14.55□□□□□ -0.08
ALMS1-202ENST00000464408 ISCUQ9H1K1 167 aa14.55□□□□□ -0.08
ALMS1-202ENST00000464408 SUDS3Q9H7L9 328 aaPredicted RBP14.55□□□□□ -0.08
ALMS1-202ENST00000464408 EPB41L5Q9HCM4 733 aa14.55□□□□□ -0.08
ALMS1-202ENST00000464408 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.55□□□□□ -0.08
ALMS1-202ENST00000464408 SEPT3Q9UH03 358 aa14.55□□□□□ -0.08
ALMS1-202ENST00000464408 PCDHGA8Q9Y5G5 932 aa14.55□□□□□ -0.08
ALMS1-202ENST00000464408 DGKBQ9Y6T7 804 aa14.55□□□□□ -0.08
ALMS1-202ENST00000464408 SCINQ9Y6U3 715 aa14.55□□□□□ -0.08
ALMS1-202ENST00000464408 COL6A6A6NMZ7 2263 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 CCDC187A0A096LP49 1063 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 CFAP69A5D8W1 941 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 SMTNL1A8MU46 457 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 H3BRJ5 948 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 CACNB4O00305 520 aaPredicted RBP14.54□□□□□ -0.08
ALMS1-202ENST00000464408 NOBOXO60393 691 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 RARAP10276 462 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 PCK1P35558 622 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 ZNF165P49910 485 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 TMPRSS3P57727 454 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 TRAF2Q12933 501 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 ZNF235Q14590 738 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 RFTN1Q14699 578 aaPredicted RBP14.54□□□□□ -0.08
ALMS1-202ENST00000464408 NR1I3Q14994 352 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 FILIP1LQ4L180 1135 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 DENND2CQ68D51 928 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 TAF8Q7Z7C8 310 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 CPNE8Q86YQ8 564 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 PSTKQ8IV42 348 aaKnown RBP14.54□□□□□ -0.08
ALMS1-202ENST00000464408 ZNF843Q8N446 348 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 PDCD6IPQ8WUM4 868 aaKnown RBP14.54□□□□□ -0.08
ALMS1-202ENST00000464408 SCG3Q8WXD2 468 aaKnown RBP14.54□□□□□ -0.08
ALMS1-202ENST00000464408 COQ10AQ96MF6 247 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 CSPG4P5Q96PW8 444 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 SMIM14Q96QK8 99 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 GFM1Q96RP9 751 aaKnown RBP14.54□□□□□ -0.08
ALMS1-202ENST00000464408 FUCA2Q9BTY2 467 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 NOD2Q9HC29 1040 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 CYP4F12Q9HCS2 524 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 MOSPD1Q9UJG1 213 aa14.54□□□□□ -0.08
ALMS1-202ENST00000464408 ATXN7L1Q9ULK2 861 aaPredicted RBP14.54□□□□□ -0.08
ALMS1-202ENST00000464408 ZFC3H1O60293 1989 aaKnown RBP14.53□□□□□ -0.08
ALMS1-202ENST00000464408 B4DGG1 531 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 TK2O00142 265 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 HTRA2O43464 458 aaPredicted RBP14.53□□□□□ -0.08
ALMS1-202ENST00000464408 MAFKO60675 156 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 FUCA1P04066 466 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 MYBL1P10243 752 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 LHCGRP22888 699 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 TRIM23P36406 574 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 ETV3P41162 512 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 SLC25A11Q02978 314 aaKnown RBP14.53□□□□□ -0.08
ALMS1-202ENST00000464408 C19orf57Q0VDD7 668 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 MMRN1Q13201 1228 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 CLN3Q13286 438 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 BROXQ5VW32 411 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 PNCKQ6P2M8 343 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 TMCO3Q6UWJ1 677 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 TMPRSS9Q7Z410 1059 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 CLEC14AQ86T13 490 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 TSPAN33Q86UF1 283 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 FAM46DQ8NEK8 389 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 ATL2Q8NHH9 583 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 WDR48Q8TAF3 677 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 GRAMD1AQ96CP6 724 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 NUS1Q96E22 293 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 LIN37Q96GY3 246 aaPredicted RBP14.53□□□□□ -0.08
ALMS1-202ENST00000464408 ZNF599Q96NL3 588 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 NUDCD1Q96RS6 583 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 DPH1Q9BZG8 443 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 THAP2Q9H0W7 228 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 LRRN3Q9H3W5 708 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 WDR26Q9H7D7 661 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 PCDH18Q9HCL0 1135 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 SSUH2Q9Y2M2 353 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 RNF215Q9Y6U7 377 aa14.53□□□□□ -0.08
ALMS1-202ENST00000464408 PRSS38A1L453 326 aa14.52□□□□□ -0.09
ALMS1-202ENST00000464408 NPIPB15A6NHN6 443 aaPredicted RBP14.52□□□□□ -0.09
ALMS1-202ENST00000464408 PLD2O14939 933 aa14.52□□□□□ -0.09
ALMS1-202ENST00000464408 HEXIM1O94992 359 aaKnown RBP14.52□□□□□ -0.09
ALMS1-202ENST00000464408 CPP00450 1065 aa14.52□□□□□ -0.09
ALMS1-202ENST00000464408 CD48P09326 243 aa14.52□□□□□ -0.09
ALMS1-202ENST00000464408 VIPR1P32241 457 aa14.52□□□□□ -0.09
ALMS1-202ENST00000464408 UGT1A5P35504 534 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms