RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 KIAA1024LP59773 190 aa15.37■□□□□ 0.05
CMSS1-202ENST00000463526 AMZ1Q400G9 498 aa15.37■□□□□ 0.05
CMSS1-202ENST00000463526 C14orf28Q4W4Y0 310 aa15.37■□□□□ 0.05
CMSS1-202ENST00000463526 MANEAQ5SRI9 462 aa15.37■□□□□ 0.05
CMSS1-202ENST00000463526 DENND2CQ68D51 928 aa15.37■□□□□ 0.05
CMSS1-202ENST00000463526 SPECC1LQ69YQ0 1117 aa15.37■□□□□ 0.05
CMSS1-202ENST00000463526 TMPRSS9Q7Z410 1059 aa15.37■□□□□ 0.05
CMSS1-202ENST00000463526 SPRED1Q7Z699 444 aa15.37■□□□□ 0.05
CMSS1-202ENST00000463526 PELI3Q8N2H9 469 aa15.37■□□□□ 0.05
CMSS1-202ENST00000463526 SGF29Q96ES7 293 aa15.37■□□□□ 0.05
CMSS1-202ENST00000463526 KCTD15Q96SI1 283 aaPredicted RBP15.37■□□□□ 0.05
CMSS1-202ENST00000463526 TRIM4Q9C037 500 aa15.37■□□□□ 0.05
CMSS1-202ENST00000463526 FAM117AQ9C073 453 aa15.37■□□□□ 0.05
CMSS1-202ENST00000463526 CLMPQ9H6B4 373 aa15.37■□□□□ 0.05
CMSS1-202ENST00000463526 DONSONQ9NYP3 566 aa15.37■□□□□ 0.05
CMSS1-202ENST00000463526 TAS2R14Q9NYV8 317 aa15.37■□□□□ 0.05
CMSS1-202ENST00000463526 FOXJ2Q9P0K8 574 aa15.37■□□□□ 0.05
CMSS1-202ENST00000463526 APPL1Q9UKG1 709 aa15.37■□□□□ 0.05
CMSS1-202ENST00000463526 NVLO15381 856 aaKnown RBP15.36■□□□□ 0.05
CMSS1-202ENST00000463526 ATMINO43313 823 aaPredicted RBP15.36■□□□□ 0.05
CMSS1-202ENST00000463526 LIPCP11150 499 aa15.36■□□□□ 0.05
CMSS1-202ENST00000463526 GM2AP17900 193 aa15.36■□□□□ 0.05
CMSS1-202ENST00000463526 ERCC2P18074 760 aa15.36■□□□□ 0.05
CMSS1-202ENST00000463526 CDK11BP21127 795 aaKnown RBP15.36■□□□□ 0.05
CMSS1-202ENST00000463526 TNFAIP3P21580 790 aa15.36■□□□□ 0.05
CMSS1-202ENST00000463526 KELP23276 732 aa15.36■□□□□ 0.05
CMSS1-202ENST00000463526 CSNK1DP48730 415 aa15.36■□□□□ 0.05
CMSS1-202ENST00000463526 MAZP56270 477 aaKnown RBP15.36■□□□□ 0.05
CMSS1-202ENST00000463526 NFKB2Q00653 900 aa15.36■□□□□ 0.05
CMSS1-202ENST00000463526 ZFP36L1Q07352 338 aaKnown RBP15.36■□□□□ 0.05
CMSS1-202ENST00000463526 HLTFQ14527 1009 aaKnown RBP eCLIP15.36■□□□□ 0.05
CMSS1-202ENST00000463526 MAP9Q49MG5 647 aa15.36■□□□□ 0.05
CMSS1-202ENST00000463526 PPP6R3Q5H9R7 873 aaPredicted RBP15.36■□□□□ 0.05
CMSS1-202ENST00000463526 PNCKQ6P2M8 343 aa15.36■□□□□ 0.05
CMSS1-202ENST00000463526 DPPA4Q7L190 304 aa15.36■□□□□ 0.05
CMSS1-202ENST00000463526 ANKRD20A12PQ8NF67 263 aa15.36■□□□□ 0.05
CMSS1-202ENST00000463526 JPH3Q8WXH2 748 aaPredicted RBP15.36■□□□□ 0.05
CMSS1-202ENST00000463526 NSMCE3Q96MG7 304 aa15.36■□□□□ 0.05
CMSS1-202ENST00000463526 CMKLR1Q99788 373 aa15.36■□□□□ 0.05
CMSS1-202ENST00000463526 SNRNP25Q9BV90 132 aaKnown RBP15.36■□□□□ 0.05
CMSS1-202ENST00000463526 SEMA6CQ9H3T2 930 aa15.36■□□□□ 0.05
CMSS1-202ENST00000463526 WDR26Q9H7D7 661 aa15.36■□□□□ 0.05
CMSS1-202ENST00000463526 CARS2Q9HA77 564 aaKnown RBP15.36■□□□□ 0.05
CMSS1-202ENST00000463526 RDH14Q9HBH5 336 aa15.36■□□□□ 0.05
CMSS1-202ENST00000463526 SPATS2LQ9NUQ6 558 aaKnown RBP15.36■□□□□ 0.05
CMSS1-202ENST00000463526 SEPT10Q9P0V9 454 aa15.36■□□□□ 0.05
CMSS1-202ENST00000463526 LRRK1Q38SD2 2015 aa15.36■□□□□ 0.05
CMSS1-202ENST00000463526 CFAP69A5D8W1 941 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 LGALS16A8MUM7 142 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 TNFRSF10CO14798 259 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 B4GAT1O43505 415 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 WISP1O95388 367 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 ALDH4A1P30038 563 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 HTR7P34969 479 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 OR1D5P58170 312 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 POLR2LP62875 67 aaKnown RBP15.35■□□□□ 0.05
CMSS1-202ENST00000463526 CYP4F2P78329 520 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 MAMLD1Q13495 774 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 ERMARDQ5T6L9 678 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 AFMIDQ63HM1 303 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 RFX8Q6ZV50 586 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 ARHGAP12Q8IWW6 846 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 TP53INP2Q8IXH6 220 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 ARFGAP1Q8N6T3 406 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 PDCD6IPQ8WUM4 868 aaKnown RBP15.35■□□□□ 0.05
CMSS1-202ENST00000463526 ECHDC3Q96DC8 303 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 PEBP4Q96S96 227 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 B4GALT6Q9UBX8 382 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 LIMA1Q9UHB6 759 aaKnown RBP15.35■□□□□ 0.05
CMSS1-202ENST00000463526 PCDHB11Q9Y5F2 797 aa15.35■□□□□ 0.05
CMSS1-202ENST00000463526 PRSS38A1L453 326 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 GOLGA6CA6NDK9 693 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 GOLGA6BA6NDN3 693 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 CYSRT1A8MQ03 144 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 RHPN2P1A8MT19 583 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 TRAFD1O14545 582 aaPredicted RBP15.34■□□□□ 0.05
CMSS1-202ENST00000463526 FAM87AP0C7U9 286 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 GOLGA6DP0CG33 693 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 PNLIPP16233 465 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 FERP16591 822 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 TRIM23P36406 574 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 B4GALNT1Q00973 533 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 BIRC2Q13490 618 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 C16orf72Q14CZ0 275 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 SLITRK4Q8IW52 837 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 NPWQ8N729 165 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 ZDHHC1Q8WTX9 485 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 NUS1Q96E22 293 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 GOLGA6AQ9NYA3 693 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 ACSL6Q9UKU0 697 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 PCDHGC4Q9Y5F7 938 aa15.34■□□□□ 0.05
CMSS1-202ENST00000463526 C9orf172C9J069 976 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 PDE2AO00408 941 aaPredicted RBP15.33■□□□□ 0.04
CMSS1-202ENST00000463526 NUDT21O43809 227 aaKnown RBP15.33■□□□□ 0.04
CMSS1-202ENST00000463526 PRPSAP2O60256 369 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 HOXC4P09017 264 aaPredicted RBP15.33■□□□□ 0.04
CMSS1-202ENST00000463526 CCL4P13236 92 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 CCNB1P14635 433 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 WT1P19544 449 aaPredicted RBP15.33■□□□□ 0.04
CMSS1-202ENST00000463526 AK4P27144 223 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms