RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 TAGLN3Q9UI15 199 aa9.98□□□□□ -0.81
PTPRD-207ENST00000463477 WNT6Q9Y6F9 365 aa9.98□□□□□ -0.81
PTPRD-207ENST00000463477 F5H423 210 aaPredicted RBP9.97□□□□□ -0.81
PTPRD-207ENST00000463477 MATN3O15232 486 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 GALR2O43603 387 aaPredicted RBP9.97□□□□□ -0.81
PTPRD-207ENST00000463477 GREM1O60565 184 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 SIN3BO75182 1162 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 KLHL2O95198 593 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 NFATC1O95644 943 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 JCHAINP01591 159 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 DCNP07585 359 aaKnown RBP9.97□□□□□ -0.81
PTPRD-207ENST00000463477 RALBP11234 206 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 COL6A2P12110 1019 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 ARSAP15289 507 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 GM2AP17900 193 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 CCR1P32246 355 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 GEMP55040 296 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 ABCE1P61221 599 aaKnown RBP9.97□□□□□ -0.81
PTPRD-207ENST00000463477 MPP3Q13368 585 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 UGP2Q16851 508 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 PCID2Q5JVF3 399 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 C10orf120Q5SQS8 335 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 BTBD8Q5XKL5 378 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 FSTL4Q6MZW2 842 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 TXNDC11Q6PKC3 985 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 MAMSTRQ6ZN01 415 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 RINLQ6ZS11 566 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 TTC7BQ86TV6 843 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 ALYREFQ86V81 257 aaKnown RBP9.97□□□□□ -0.81
PTPRD-207ENST00000463477 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.97□□□□□ -0.81
PTPRD-207ENST00000463477 CPA6Q8N4T0 437 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 TEX9Q8N6V9 391 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 CNTD1Q8N815 330 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 DTWD2Q8NBA8 298 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 NETO2Q8NC67 525 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 TTC16Q8NEE8 873 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 TTC8Q8TAM2 541 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 NSMCE1Q8WV22 266 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 PRR11Q96HE9 360 aaPredicted RBP9.97□□□□□ -0.81
PTPRD-207ENST00000463477 C1orf74Q96LT6 269 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 ZNF778Q96MU6 729 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 AGAP3Q96P47 875 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 NUDCD1Q96RS6 583 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 SORT1Q99523 831 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 GPR22Q99680 433 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 RHOJQ9H4E5 214 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 GLOD4Q9HC38 313 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 DONSONQ9NYP3 566 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 TMEM216Q9P0N5 145 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 SLC17A6Q9P2U8 582 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 PPARGC1AQ9UBK2 798 aaKnown RBP9.97□□□□□ -0.81
PTPRD-207ENST00000463477 NUDT5Q9UKK9 219 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 SH3BP1Q9Y3L3 701 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 LRRC42Q9Y546 428 aa9.97□□□□□ -0.81
PTPRD-207ENST00000463477 KCNU1A8MYU2 1149 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 F8W8V4 182 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 TOP3BO95985 862 aaKnown RBP9.96□□□□□ -0.81
PTPRD-207ENST00000463477 CHRNB1P11230 501 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 CPA3P15088 417 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 GJA4P35212 333 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 SOX9P48436 509 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 ANO4Q32M45 955 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 ACCSLQ4AC99 568 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 RABGAP1LQ5R372 815 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 CERCAMQ5T4B2 595 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 ACBD5Q5T8D3 534 aaPredicted RBP9.96□□□□□ -0.81
PTPRD-207ENST00000463477 C16orf46Q6P387 395 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 TREML1Q86YW5 311 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 C10orf107Q8IVU9 208 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 ATPAF2Q8N5M1 289 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 GIMAP7Q8NHV1 300 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 RNF34Q969K3 372 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 MCUR1Q96AQ8 359 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 CHFRQ96EP1 664 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 SERPINB11Q96P15 392 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 TBL1YQ9BQ87 522 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 IRF2BPLQ9H1B7 796 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 BATF3Q9NR55 127 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 OLA1Q9NTK5 396 aaKnown RBP9.96□□□□□ -0.81
PTPRD-207ENST00000463477 PIH1D1Q9NWS0 290 aaKnown RBP9.96□□□□□ -0.81
PTPRD-207ENST00000463477 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.96□□□□□ -0.81
PTPRD-207ENST00000463477 NDRG2Q9UN36 371 aaKnown RBP9.96□□□□□ -0.81
PTPRD-207ENST00000463477 APOBEC2Q9Y235 224 aaKnown RBP9.96□□□□□ -0.81
PTPRD-207ENST00000463477 DNAJC16Q9Y2G8 782 aa9.96□□□□□ -0.81
PTPRD-207ENST00000463477 A0A096LPK6 155 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 ZNF195O14628 629 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 ITM2AO43736 263 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 MAFKO60675 156 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 DIAPH2O60879 1101 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 USP12O75317 370 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 PAGE1O75459 146 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 SNUPNO95149 360 aaKnown RBP9.96□□□□□ -0.82
PTPRD-207ENST00000463477 SLC2A3P11169 496 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 PRDX6P30041 224 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 ADRA1AP35348 466 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 GALK1P51570 392 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 ILF2Q12905 390 aaKnown RBP9.96□□□□□ -0.82
PTPRD-207ENST00000463477 DHCR24Q15392 516 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 TMEM196Q5HYL7 178 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 DGKKQ5KSL6 1271 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms