RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 AP2M1Q96CW1 435 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 SLC25A23Q9BV35 468 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 UGT2B28Q9BY64 529 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 TMEM216Q9P0N5 145 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 SNX10Q9Y5X0 201 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 ZNF536O15090 1300 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 ATG7O95352 703 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 ALAS2P22557 587 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 POLD2P49005 469 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 MON1BQ7L1V2 547 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 ABCB8Q9NUT2 735 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 GABRQQ9UN88 632 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 NPEPPSL1A6NEC2 478 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 H3BM21 787 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 RFC2P35250 354 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 FLT3P36888 993 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 GSSP48637 474 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 MRPS35P82673 323 aaKnown RBP12.84□□□□□ -0.35
NUP58-206ENST00000463407 CCDC185Q8N715 623 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 RNF148Q8N7C7 305 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 SH3RF2Q8TEC5 729 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 RPL10LQ96L21 214 aaKnown RBP12.84□□□□□ -0.35
NUP58-206ENST00000463407 DEPDC7Q96QD5 511 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 TMEM175Q9BSA9 504 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 ZDHHC4Q9NPG8 344 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 SCAMP1O15126 338 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 SLC31A1O15431 190 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 ITGA2BP08514 1039 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 HSMCR30P0CW71 290 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 MMP8P22894 467 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 AKT2P31751 481 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 TIE1P35590 1138 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 RAD23AP54725 363 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 RPL38P63173 70 aaKnown RBP12.84□□□□□ -0.35
NUP58-206ENST00000463407 DSC2Q02487 901 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 AUHQ13825 339 aaKnown RBP12.84□□□□□ -0.35
NUP58-206ENST00000463407 IZUMO2Q6UXV1 221 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 CYP2R1Q6VVX0 501 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 APTXQ7Z2E3 356 aaKnown RBP12.84□□□□□ -0.35
NUP58-206ENST00000463407 C17orf64Q86WR6 236 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 RNF145Q96MT1 663 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 GPR88Q9GZN0 384 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 ROGDIQ9GZN7 287 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 DPEP2Q9H4A9 486 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 CNOT3O75175 753 aaKnown RBP12.84□□□□□ -0.35
NUP58-206ENST00000463407 ATP6V0D1P61421 351 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 DUPD1Q68J44 220 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 PPP3R2Q96LZ3 170 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 TMEM79Q9BSE2 394 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 FBXO5Q9UKT4 447 aa12.84□□□□□ -0.35
NUP58-206ENST00000463407 FAM20BO75063 409 aa12.83□□□□□ -0.35
NUP58-206ENST00000463407 MYBL2P10244 700 aa12.83□□□□□ -0.35
NUP58-206ENST00000463407 NAGLUP54802 743 aa12.83□□□□□ -0.35
NUP58-206ENST00000463407 NAA20P61599 178 aa12.83□□□□□ -0.35
NUP58-206ENST00000463407 USP4Q13107 963 aa12.83□□□□□ -0.35
NUP58-206ENST00000463407 KPNB1Q14974 876 aaKnown RBP12.83□□□□□ -0.35
NUP58-206ENST00000463407 BHLHB9Q6PI77 547 aa12.83□□□□□ -0.35
NUP58-206ENST00000463407 EPHX4Q8IUS5 362 aa12.83□□□□□ -0.35
NUP58-206ENST00000463407 TSTD1Q8NFU3 115 aa12.83□□□□□ -0.35
NUP58-206ENST00000463407 BTBD9Q96Q07 612 aa12.83□□□□□ -0.35
NUP58-206ENST00000463407 CDRT15Q96T59 188 aa12.83□□□□□ -0.35
NUP58-206ENST00000463407 BDH2Q9BUT1 245 aa12.83□□□□□ -0.35
NUP58-206ENST00000463407 ST6GALNAC4Q9H4F1 302 aa12.83□□□□□ -0.35
NUP58-206ENST00000463407 PCDHGC3Q9UN70 934 aa12.83□□□□□ -0.35
NUP58-206ENST00000463407 TK2O00142 265 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 SLC25A12O75746 678 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 PDE5AO76074 875 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 ALPPL2P10696 532 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 GNSP15586 552 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 HTR7P34969 479 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 PURAQ00577 322 aaKnown RBP12.83□□□□□ -0.36
NUP58-206ENST00000463407 CPSF6Q16630 551 aaKnown RBP eCLIP12.83□□□□□ -0.36
NUP58-206ENST00000463407 CAPN13Q6MZZ7 669 aaPredicted RBP12.83□□□□□ -0.36
NUP58-206ENST00000463407 FAM180AQ6UWF9 173 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 MACC1Q6ZN28 852 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 ZSCAN18Q8TBC5 510 aaPredicted RBP12.83□□□□□ -0.36
NUP58-206ENST00000463407 FZD8Q9H461 694 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 CACNG4Q9UBN1 327 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 TLL2Q9Y6L7 1015 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 NID2Q14112 1375 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 PAICSP22234 425 aaKnown RBP12.83□□□□□ -0.36
NUP58-206ENST00000463407 LRPAP1P30533 357 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 SOX6P35712 828 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 RPL3P39023 403 aaKnown RBP12.83□□□□□ -0.36
NUP58-206ENST00000463407 PTPN9P43378 593 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 DGKEP52429 567 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 YBEYP58557 167 aaPredicted RBP12.83□□□□□ -0.36
NUP58-206ENST00000463407 PLEKHA7Q6IQ23 1121 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 ALKBH2Q6NS38 261 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 AMIGO3Q86WK7 504 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 ITFG1Q8TB96 612 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 RHOBTB2Q9BYZ6 727 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 MAGEH1Q9H213 219 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 NMUR1Q9HB89 426 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 TBC1D23Q9NUY8 699 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 RCOR3Q9P2K3 495 aaPredicted RBP12.83□□□□□ -0.36
NUP58-206ENST00000463407 NRIP1P48552 1158 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 MAPKAPK2P49137 400 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 CACNG1Q06432 222 aa12.83□□□□□ -0.36
NUP58-206ENST00000463407 CHSY3Q70JA7 882 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms