RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 MPSTP25325 297 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 GKP32189 559 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 CD70P32970 193 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 CTNNB1P35222 781 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 IDH3AP50213 366 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 FPGSQ05932 587 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 SLC14A2Q15849 920 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 LIPMQ5VYY2 423 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 FAM219BQ5XKK7 198 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 ZNF783Q6ZMS7 281 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 GALNT7Q86SF2 657 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 WDR75Q8IWA0 830 aaKnown RBP12.84□□□□□ -0.35
VAPB-203ENST00000463370 PARP9Q8IXQ6 854 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 EFHBQ8N7U6 833 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 MRPL43Q8N983 215 aaKnown RBP12.84□□□□□ -0.35
VAPB-203ENST00000463370 TXNDC5Q8NBS9 432 aaKnown RBP12.84□□□□□ -0.35
VAPB-203ENST00000463370 MAPK15Q8TD08 544 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 PPP4R1Q8TF05 950 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 TMEM106CQ9BVX2 250 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 TBC1D10AQ9BXI6 508 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 BPIFA1Q9NP55 256 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 NLE1Q9NVX2 485 aaPredicted RBP12.84□□□□□ -0.35
VAPB-203ENST00000463370 FNDC3AQ9Y2H6 1198 aaKnown RBP12.84□□□□□ -0.35
VAPB-203ENST00000463370 SH3BP1Q9Y3L3 701 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 SZT2Q5T011 3432 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 A0A087X1B8 175 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 CARNS1A5YM72 827 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 GPR39O43194 453 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 SYN1P17600 705 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 IRS1P35568 1242 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 CPA2P48052 419 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 KCNC1P48547 511 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 CLCN4P51793 760 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 RHOAP61586 193 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 LMAN2Q12907 356 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 PPIGQ13427 754 aaKnown RBP eCLIP12.84□□□□□ -0.352e-9■□□□□ 10.5
VAPB-203ENST00000463370 ARL13AQ5H913 290 aaPredicted RBP12.84□□□□□ -0.35
VAPB-203ENST00000463370 GPR158Q5T848 1215 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 CCDC149Q6ZUS6 474 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 RPS27LQ71UM5 84 aaKnown RBP12.84□□□□□ -0.35
VAPB-203ENST00000463370 UBE2Q1Q7Z7E8 422 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 LSMEM2Q8N112 164 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 SHKBP1Q8TBC3 707 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 POF1BQ8WVV4 589 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 UBXN10Q96LJ8 280 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 C17orf80Q9BSJ5 609 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 MRPL46Q9H2W6 279 aaKnown RBP12.84□□□□□ -0.35
VAPB-203ENST00000463370 MAN1C1Q9NR34 630 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 ASAH2Q9NR71 780 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 CATSPERZQ9NTU4 200 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 LSM7Q9UK45 103 aaKnown RBP12.84□□□□□ -0.35
VAPB-203ENST00000463370 INTS6Q9UL03 887 aaKnown RBP12.84□□□□□ -0.35
VAPB-203ENST00000463370 SSX2IPQ9Y2D8 614 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 TRAV19A0A0A6YYK7 116 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 TYW5A2RUC4 315 aaKnown RBP12.83□□□□□ -0.36
VAPB-203ENST00000463370 TLL1O43897 1013 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 MOSPD3O75425 235 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 ATP5HO75947 161 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 APOA4P06727 396 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 MYOGP15173 224 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 ALOX15P16050 662 aaPredicted RBP12.83□□□□□ -0.36
VAPB-203ENST00000463370 BMPR1AP36894 532 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 INO80DQ53TQ3 878 aaPredicted RBP12.83□□□□□ -0.36
VAPB-203ENST00000463370 TECRLQ5HYJ1 363 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 RINLQ6ZS11 566 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 CAMK1DQ8IU85 385 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 CMTM8Q8IZV2 173 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 DCAF4L2Q8NA75 395 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 GPR150Q8NGU9 434 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 FBXO27Q8NI29 283 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 RDH11Q8TC12 318 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 SP7Q8TDD2 431 aaPredicted RBP12.83□□□□□ -0.36
VAPB-203ENST00000463370 PEX13Q92968 403 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 EID2BQ96D98 161 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 RAD9AQ99638 391 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 FAM96AQ9H5X1 160 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 COG4Q9H9E3 785 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 POLR3BQ9NW08 1133 aaPredicted RBP12.83□□□□□ -0.36
VAPB-203ENST00000463370 LNPEPQ9UIQ6 1025 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 ARIH1Q9Y4X5 557 aaPredicted RBP12.83□□□□□ -0.36
VAPB-203ENST00000463370 PCDHB9Q9Y5E1 797 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 PRR5-ARHGAP8B1AHC4 643 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 TMEM114B3SHH9 223 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 TRAFD1O14545 582 aaPredicted RBP12.83□□□□□ -0.36
VAPB-203ENST00000463370 CRTAMO95727 393 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 CTSOP43234 321 aaPredicted RBP12.83□□□□□ -0.36
VAPB-203ENST00000463370 STC1P52823 247 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 ARHGAP8P85298 464 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 NSUN2Q08J23 767 aaKnown RBP eCLIP12.83□□□□□ -0.36
VAPB-203ENST00000463370 CAMK1Q14012 370 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 KRT72Q14CN4 511 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 TAF1AQ15573 450 aaPredicted RBP12.83□□□□□ -0.36
VAPB-203ENST00000463370 SLC5A9Q2M3M2 681 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 SLC9B1Q4ZJI4 515 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 MRNIPQ6NTE8 343 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 LCA5Q86VQ0 697 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 PIANPQ8IYJ0 282 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 SPPL3Q8TCT6 385 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 INPP5DQ92835 1189 aa12.83□□□□□ -0.36
VAPB-203ENST00000463370 NSL1Q96IY1 281 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms