RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 FBXW10Q5XX13 1052 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 PM20D1Q6GTS8 502 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 OR6B2Q6IFH4 312 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 MRM1Q6IN84 353 aaKnown RBP6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 TLDC1Q6P9B6 456 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 FOXR1Q6PIV2 292 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 RAD9BQ6WBX8 426 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 GK5Q6ZS86 529 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 SPATC1Q76KD6 591 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 TMEM110Q86TL2 294 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 WDTC1Q8N5D0 677 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 IRGQQ8WZA9 623 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 NDRG1Q92597 394 aaKnown RBP6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 P3H4Q92791 437 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 OTUB2Q96DC9 234 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 C18orf8Q96DM3 657 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 SPDL1Q96EA4 605 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 SLC46A1Q96NT5 459 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 CPXM1Q96SM3 734 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 PCDHB18PQ96TA0 734 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 TRIM62Q9BVG3 475 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 ACE2Q9BYF1 805 aaPredicted RBP6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 TSGA10Q9BZW7 698 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 SLC25A18Q9H1K4 315 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 EPN3Q9H201 632 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 ZNF768Q9H5H4 540 aaKnown RBP6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 RABEP2Q9H5N1 569 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 GPAMQ9HCL2 828 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 SPHK2Q9NRA0 654 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 ABHD10Q9NUJ1 306 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 DNAJC17Q9NVM6 304 aaKnown RBP6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 QPCTLQ9NXS2 382 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 GPN3Q9UHW5 284 aaPredicted RBP6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 CYTH4Q9UIA0 394 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 NAGPAQ9UK23 515 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 FAM169AQ9Y6X4 670 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 NF1P21359 2839 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 TDRD6O60522 2096 aaKnown RBP6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 ZFC3H1O60293 1989 aaKnown RBP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 NAV3Q8IVL0 2385 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 BSNQ9UPA5 3926 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 CTAGE9A4FU28 777 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 SYNCRIPO60506 623 aaKnown RBP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 TLR5O60602 858 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 TSPAN3O60637 253 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 CSO75390 466 aaKnown RBP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 ASMTLO95671 621 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 PENKP01210 267 aaPredicted RBP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 ERBB2P04626 1255 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 PLEKP08567 350 aaPredicted RBP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 CISD3P0C7P0 127 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 ZDHHC11BP0C7U3 371 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 MBL2P11226 248 aaPredicted RBP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 UNGP13051 313 aaPredicted RBP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 RARGP13631 454 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 NFKB1P19838 968 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 TNFRSF8P28908 595 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 HNRNPH3P31942 346 aaKnown RBP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 STIP1P31948 543 aaKnown RBP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 ATP5C1P36542 298 aaKnown RBP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 RANBP1P43487 201 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 RPL34P49207 117 aaKnown RBP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 TUBP50607 506 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 TBX4P57082 545 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 DAOAP59103 153 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 SLC6A3Q01959 620 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 PLAURQ03405 335 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 LBRQ14739 615 aaKnown RBP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 CLEC16AQ2KHT3 1053 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 KRTAP21-3Q3LHN1 58 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 PTPN20Q4JDL3 420 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 TM4SF20Q53R12 229 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 EFHC1Q5JVL4 640 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 SH2D4BQ5SQS7 431 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 C10orf120Q5SQS8 335 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 SNX30Q5VWJ9 437 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 CDCP2Q5VXM1 449 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 BSPRYQ5W0U4 402 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 HGSNATQ68CP4 663 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 ACAD10Q6JQN1 1059 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 PPP1R2P3Q6NXS1 205 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 C16orf87Q6PH81 154 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 ZNF572Q7Z3I7 529 aaPredicted RBP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 ZNF571Q7Z3V5 609 aaPredicted RBP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 SCD5Q86SK9 330 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 DDX42Q86XP3 938 aaKnown RBP eCLIP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 PHF13Q86YI8 300 aaPredicted RBP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 ZDHHC17Q8IUH5 632 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 SRRM1Q8IYB3 904 aaKnown RBP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 SCML4Q8N228 414 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 SMYD1Q8NB12 490 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 SLC30A5Q8TAD4 765 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 CLEC4CQ8WTT0 213 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 RNF139Q8WU17 664 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 SKA1Q96BD8 255 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 FAM149B1Q96BN6 582 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 SGF29Q96ES7 293 aa6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 RBM41Q96IZ5 413 aaKnown RBP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 XPO6Q96QU8 1125 aaKnown RBP6.09□□□□□ -1.43
SMARCC1-204ENST00000462198 CDK5RAP1Q96SZ6 601 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms