RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 CLEC11AQ9Y240 323 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 RNF103-CHMP3A0A140T963 221 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 MYBPHLA2RUH7 354 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 TRIM64A6NGJ6 449 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 H3BMQ9 156 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 HLA-DQB2P05538 268 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 KCNE1P15382 129 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 CAPN3P20807 821 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 CCNCP24863 283 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 CDH13P55290 713 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 ANKRD23Q86SG2 305 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 SLC15A3Q8IY34 581 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 PCYOX1LQ8NBM8 494 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 SH3RF2Q8TEC5 729 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 RNF34Q969K3 372 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 MRGPRX2Q96LB1 330 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 COG8Q96MW5 612 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 TBCCD1Q9NVR7 557 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 HACD3Q9P035 362 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 ABCD2Q9UBJ2 740 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 CDH7Q9ULB5 785 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 ZNF711Q9Y462 761 aa18.5■□□□□ 0.55
HPS3-204ENST00000462030 A0A1W2PPW3 197 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 ZNF701M0R085 212 aaPredicted RBP18.49■□□□□ 0.55
HPS3-204ENST00000462030 XPOTO43592 962 aaKnown RBP18.49■□□□□ 0.55
HPS3-204ENST00000462030 DARSP14868 501 aaKnown RBP18.49■□□□□ 0.55
HPS3-204ENST00000462030 ATP4BP51164 291 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 ATP6V0D1P61421 351 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 ATP6AP1Q15904 470 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 PCSK7Q16549 785 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 GPR107Q5VW38 600 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 DCLRE1AQ6PJP8 1040 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 TMEM207Q6UWW9 146 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 GIPC3Q8TF64 312 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 PCED1BQ96HM7 432 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 RPL10LQ96L21 214 aaKnown RBP18.49■□□□□ 0.55
HPS3-204ENST00000462030 IL12RB2Q99665 862 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 NAA50Q9GZZ1 169 aaKnown RBP18.49■□□□□ 0.55
HPS3-204ENST00000462030 MROH8Q9H579 483 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 MRM3Q9HC36 420 aaKnown RBP18.49■□□□□ 0.55
HPS3-204ENST00000462030 TIMM13Q9Y5L4 95 aaPredicted RBP18.49■□□□□ 0.55
HPS3-204ENST00000462030 BRCA1P38398 1863 aaKnown RBP18.49■□□□□ 0.55
HPS3-204ENST00000462030 ZFC3H1O60293 1989 aaKnown RBP18.49■□□□□ 0.55
HPS3-204ENST00000462030 AQP12BA6NM10 295 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 FXYD1O00168 92 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 GABRDO14764 452 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 GIPC1O14908 333 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 MAFKO60675 156 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 ZBTB7AO95365 584 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 RBP1P09455 135 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 IMPDH1P20839 514 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 CD247P20963 164 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 GEMP55040 296 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 NAA20P61599 178 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 GALNT1Q10472 559 aaPredicted RBP18.49■□□□□ 0.55
HPS3-204ENST00000462030 RAB39AQ14964 217 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 ZNF678Q5SXM1 525 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 LDB1Q86U70 411 aaPredicted RBP18.49■□□□□ 0.55
HPS3-204ENST00000462030 AQP12AQ8IXF9 295 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 PTCD2Q8WV60 388 aaKnown RBP18.49■□□□□ 0.55
HPS3-204ENST00000462030 UBXN10Q96LJ8 280 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 NDFIP2Q9NV92 336 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 CMTM6Q9NX76 183 aa18.49■□□□□ 0.55
HPS3-204ENST00000462030 PPP6CO00743 305 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 F9P00740 461 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 FASP25445 335 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 PSMA4P25789 261 aaKnown RBP18.48■□□□□ 0.55
HPS3-204ENST00000462030 VARSP26640 1264 aaKnown RBP18.48■□□□□ 0.55
HPS3-204ENST00000462030 CCT8P50990 548 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 INPP5AQ14642 412 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 ACAP2Q15057 778 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 UGT3A2Q3SY77 523 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 UNC50Q53HI1 259 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 XKR4Q5GH76 650 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 RAB41Q5JT25 222 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 AARS2Q5JTZ9 985 aaKnown RBP18.48■□□□□ 0.55
HPS3-204ENST00000462030 GPR158Q5T848 1215 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 HECTD2Q5U5R9 776 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 TMEM26Q6ZUK4 368 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 FASTKD5Q7L8L6 764 aaKnown RBP18.48■□□□□ 0.55
HPS3-204ENST00000462030 SLC22A9Q8IVM8 553 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 ADGRG5Q8IZF4 528 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 EXT2Q93063 718 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 SOX17Q9H6I2 414 aaPredicted RBP18.48■□□□□ 0.55
HPS3-204ENST00000462030 ENTPD7Q9NQZ7 604 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 DSEQ9UL01 958 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 NYNRINQ9P2P1 1898 aaKnown RBP18.48■□□□□ 0.55
HPS3-204ENST00000462030 ADM5C9JUS6 153 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 EI24O14681 340 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 ACOX3O15254 700 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 IL10P22301 178 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 FGD3Q5JSP0 725 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 UBXN11Q5T124 520 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 MOB2Q70IA6 237 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 CCDC117Q8IWD4 279 aaPredicted RBP18.48■□□□□ 0.55
HPS3-204ENST00000462030 EMID1Q96A84 441 aaPredicted RBP18.48■□□□□ 0.55
HPS3-204ENST00000462030 THAP11Q96EK4 314 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 SLC39A8Q9C0K1 460 aa18.48■□□□□ 0.55
HPS3-204ENST00000462030 PAIP1Q9H074 479 aaKnown RBP18.48■□□□□ 0.55
HPS3-204ENST00000462030 DNAJC15Q9Y5T4 150 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms