RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 TXNDC8Q6A555 127 aa20.27■□□□□ 0.84
CCM2-203ENST00000461377 TMEM207Q6UWW9 146 aa20.27■□□□□ 0.84
CCM2-203ENST00000461377 PIWIL4Q7Z3Z4 852 aaKnown RBP20.27■□□□□ 0.84
CCM2-203ENST00000461377 ARHGAP24Q8N264 748 aa20.27■□□□□ 0.84
CCM2-203ENST00000461377 C11orf49Q9H6J7 331 aa20.27■□□□□ 0.84
CCM2-203ENST00000461377 ZDHHC2Q9UIJ5 367 aa20.27■□□□□ 0.84
CCM2-203ENST00000461377 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.27■□□□□ 0.84
CCM2-203ENST00000461377 CRYL1Q9Y2S2 319 aa20.27■□□□□ 0.84
CCM2-203ENST00000461377 RAI2Q9Y5P3 530 aa20.27■□□□□ 0.84
CCM2-203ENST00000461377 CPQQ9Y646 472 aa20.27■□□□□ 0.84
CCM2-203ENST00000461377 SLCO1B7G3V0H7 640 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 GRID2O43424 1007 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 SNUPNO95149 360 aaKnown RBP20.26■□□□□ 0.83
CCM2-203ENST00000461377 LUC7L3O95232 432 aaKnown RBP20.26■□□□□ 0.83
CCM2-203ENST00000461377 TFEBP19484 476 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 MZF1P28698 734 aaPredicted RBP20.26■□□□□ 0.83
CCM2-203ENST00000461377 PGM1P36871 562 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 STC1P52823 247 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 DNAL1Q4LDG9 190 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 SWT1Q5T5J6 900 aaKnown RBP20.26■□□□□ 0.83
CCM2-203ENST00000461377 SEL1L3Q68CR1 1132 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 GLT6D1Q7Z4J2 308 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 FAM217AQ8IXS0 508 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 MDGA1Q8NFP4 955 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 CCDC126Q96EE4 140 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 YME1L1Q96TA2 773 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 ZBP1Q9H171 429 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 RNPEPL1Q9HAU8 725 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 LHX3Q9UBR4 397 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 VTI1BQ9UEU0 232 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 ASB3Q9Y575 518 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 OR51B4Q9Y5P0 310 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 SCAMP3O14828 347 aaKnown RBP20.26■□□□□ 0.83
CCM2-203ENST00000461377 PDHA1P08559 390 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 HDCP19113 662 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 SUOXP51687 545 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 RAP1GDS1P52306 607 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 PREPLQ4J6C6 727 aaPredicted RBP20.26■□□□□ 0.83
CCM2-203ENST00000461377 LINGO4Q6UY18 593 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 TRIM67Q6ZTA4 783 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 SDCCAG8Q86SQ7 713 aaPredicted RBP20.26■□□□□ 0.83
CCM2-203ENST00000461377 CCNYL1Q8N7R7 359 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 OR52B2Q96RD2 323 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 TCF7L2Q9NQB0 619 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 MAN1C1Q9NR34 630 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 NCKIPSDQ9NZQ3 722 aa20.26■□□□□ 0.83
CCM2-203ENST00000461377 NEMP2A6NFY4 417 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 A8MT66 165 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 KIAA0355O15063 1070 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 SPATA31D3P0C874 917 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 ACRP10323 421 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 NCF2P19878 526 aaPredicted RBP20.25■□□□□ 0.83
CCM2-203ENST00000461377 TIAL1Q01085 375 aaKnown RBP eCLIP20.25■□□□□ 0.83
CCM2-203ENST00000461377 INO80DQ53TQ3 878 aaPredicted RBP20.25■□□□□ 0.83
CCM2-203ENST00000461377 NCEH1Q6PIU2 408 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 AFTPHQ6ULP2 937 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 SPATA31D4Q6ZUB0 917 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 PIM3Q86V86 326 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 LPCAT1Q8NF37 534 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 OR4K2Q8NGD2 314 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 SH3RF2Q8TEC5 729 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 TMA16Q96EY4 203 aaKnown RBP20.25■□□□□ 0.83
CCM2-203ENST00000461377 PAWRQ96IZ0 340 aaKnown RBP20.25■□□□□ 0.83
CCM2-203ENST00000461377 CNDP1Q96KN2 507 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 FEM1AQ9BSK4 669 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 EBF2Q9HAK2 575 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 POPDC3Q9HBV1 291 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 INTS10Q9NVR2 710 aaKnown RBP20.25■□□□□ 0.83
CCM2-203ENST00000461377 PCDHGC4Q9Y5F7 938 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 TYW5A2RUC4 315 aaKnown RBP20.25■□□□□ 0.83
CCM2-203ENST00000461377 E9PBE3 544 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 KLHL41O60662 606 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 ENTPD5O75356 428 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 CTSAP10619 480 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 KCNA5P22460 613 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 CPOXP36551 454 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 TRAF2Q12933 501 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 GPR158Q5T848 1215 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 ENDOVQ8N8Q3 282 aaKnown RBP20.25■□□□□ 0.83
CCM2-203ENST00000461377 ALG14Q96F25 216 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 AARSD1Q9BTE6 412 aaKnown RBP20.25■□□□□ 0.83
CCM2-203ENST00000461377 NKX1-2Q9UD57 310 aaPredicted RBP20.25■□□□□ 0.83
CCM2-203ENST00000461377 STK39Q9UEW8 545 aa20.25■□□□□ 0.83
CCM2-203ENST00000461377 MTF2Q9Y483 593 aaPredicted RBP20.25■□□□□ 0.83
CCM2-203ENST00000461377 TGM5O43548 720 aa20.24■□□□□ 0.83
CCM2-203ENST00000461377 ZBTB14O43829 449 aa20.24■□□□□ 0.83
CCM2-203ENST00000461377 FGF18O76093 207 aa20.24■□□□□ 0.83
CCM2-203ENST00000461377 BAIAP3O94812 1187 aa20.24■□□□□ 0.83
CCM2-203ENST00000461377 IPO13O94829 963 aaKnown RBP20.24■□□□□ 0.83
CCM2-203ENST00000461377 SLC4A1P02730 911 aa20.24■□□□□ 0.83
CCM2-203ENST00000461377 CNPP09543 421 aaKnown RBP20.24■□□□□ 0.83
CCM2-203ENST00000461377 EZRP15311 586 aaKnown RBP20.24■□□□□ 0.83
CCM2-203ENST00000461377 GABRR2P28476 465 aa20.24■□□□□ 0.83
CCM2-203ENST00000461377 PRDX6P30041 224 aa20.24■□□□□ 0.83
CCM2-203ENST00000461377 GJA8P48165 433 aa20.24■□□□□ 0.83
CCM2-203ENST00000461377 CYP4F8P98187 520 aa20.24■□□□□ 0.83
CCM2-203ENST00000461377 PHTF2Q8N3S3 785 aa20.24■□□□□ 0.83
CCM2-203ENST00000461377 KDM1BQ8NB78 822 aa20.24■□□□□ 0.83
CCM2-203ENST00000461377 SMIM14Q96QK8 99 aa20.24■□□□□ 0.83
CCM2-203ENST00000461377 ADGRE3Q9BY15 652 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms