RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 GNEQ9Y223 722 aaKnown RBP9.01□□□□□ -0.97
BRCA1-205ENST00000461221 OAS3Q9Y6K5 1087 aaKnown RBP9.01□□□□□ -0.97
BRCA1-205ENST00000461221 E5RJQ4 531 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 UBE2Q2LH0YL09 131 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 SNX3O60493 162 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 NTSR2O95665 410 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 KCNA5P22460 613 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 BDNFP23560 247 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 ARF3P61204 181 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-205ENST00000461221 ARF1P84077 181 aaKnown RBP9.01□□□□□ -0.97
BRCA1-205ENST00000461221 ABRQ12979 859 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 MPPE1Q53F39 396 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 PPP1R15BQ5SWA1 713 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 ZDHHC20Q5W0Z9 365 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 UNC5AQ6ZN44 842 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 HJURPQ8NCD3 748 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-205ENST00000461221 SYTL5Q8TDW5 730 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-205ENST00000461221 KCNS3Q9BQ31 491 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 ZYG11BQ9C0D3 744 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 MED28Q9H204 178 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 TMEM27Q9HBJ8 222 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 C12orf4Q9NQ89 552 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 TRPV5Q9NQA5 729 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 AP4B1Q9Y6B7 739 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 FAM172BPA6NC97 362 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 SIGLEC16A6NMB1 481 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 TFPIP10646 304 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 GABRB2P47870 512 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 ATXN1P54253 815 aaKnown RBP9.01□□□□□ -0.97
BRCA1-205ENST00000461221 VPS26BQ4G0F5 336 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 CES5AQ6NT32 575 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 KIAA1324Q6UXG2 1013 aaKnown RBP9.01□□□□□ -0.97
BRCA1-205ENST00000461221 TPGS1Q6ZTW0 290 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 CDYL2Q8N8U2 506 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 C1GALT1C1Q96EU7 318 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 FCRL4Q96PJ5 515 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 IKZF2Q9UKS7 526 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 PRMT5O14744 637 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-205ENST00000461221 AKR1A1P14550 325 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 ITPKBP27987 946 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 CTSKP43235 329 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 EIF5AP63241 154 aaKnown RBP9.01□□□□□ -0.97
BRCA1-205ENST00000461221 SOCS4Q8WXH5 440 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 BTRCQ9Y297 605 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 MEMO1Q9Y316 297 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 ABCA8O94911 1581 aa9.01□□□□□ -0.97
BRCA1-205ENST00000461221 SMCO3A2RU48 225 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 RGS10O43665 173 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 MPZL2O60487 215 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 USP12O75317 370 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 SLC22A3O75751 556 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 CCNKO75909 580 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 WFS1O76024 890 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 FAM153BP0C7A2 387 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 OAZ1P54368 228 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 MEA1Q16626 185 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 PDK4Q16654 411 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 FAM153CQ494X1 144 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 WDR59Q6PJI9 974 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 PHC3Q8NDX5 983 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 FAM81AQ8TBF8 368 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 ACER1Q8TDN7 264 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 AGAP11Q8TF27 550 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 PIGKQ92643 395 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 AP2M1Q96CW1 435 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 SP140LQ9H930 580 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 R3HDM2Q9Y2K5 976 aaKnown RBP9□□□□□ -0.97
BRCA1-205ENST00000461221 NOS1APO75052 506 aaPredicted RBP9□□□□□ -0.97
BRCA1-205ENST00000461221 ASGR1P07306 291 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 CCNB1P14635 433 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 KELP23276 732 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 ABL2P42684 1182 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 PSEN2P49810 448 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 QSOX2Q6ZRP7 698 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 SMIM5Q71RC9 77 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 GALNT7Q86SF2 657 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 CACUL1Q86Y37 369 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 OR2L5Q8NG80 312 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 CLHC1Q8NHS4 586 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 IPCEF1Q8WWN9 437 aaPredicted RBP9□□□□□ -0.97
BRCA1-205ENST00000461221 BAP1Q92560 729 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 TIFAQ96CG3 184 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 AIFM2Q9BRQ8 373 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 RTKNQ9BST9 563 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 CLEC4AQ9UMR7 237 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 FRMPD4Q14CM0 1322 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 DISP1Q96F81 1524 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 KCNQ2O43526 872 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 CCNE2O96020 404 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 RB1P06400 928 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 LPOP22079 712 aaPredicted RBP9□□□□□ -0.97
BRCA1-205ENST00000461221 MANFP55145 182 aaKnown RBP9□□□□□ -0.97
BRCA1-205ENST00000461221 GRM3Q14832 879 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 PTPRNQ16849 979 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 FAM91A1Q658Y4 838 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 RBFAQ8N0V3 343 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 ALLCQ8N6M5 410 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 BEND7Q8N7W2 519 aaPredicted RBP9□□□□□ -0.97
BRCA1-205ENST00000461221 RASSF5Q8WWW0 418 aa9□□□□□ -0.97
BRCA1-205ENST00000461221 CCDC28BQ9BUN5 200 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms