RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 ZNF473Q8WTR7 871 aaKnown RBP11.15□□□□□ -0.63
APTX-209ENST00000460940 IMP4Q96G21 291 aaKnown RBP11.15□□□□□ -0.63
APTX-209ENST00000460940 FEM1CQ96JP0 617 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 NSMCE3Q96MG7 304 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 AGAP3Q96P47 875 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 TDRD1Q9BXT4 1180 aaKnown RBP11.15□□□□□ -0.63
APTX-209ENST00000460940 GLOD4Q9HC38 313 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 PCDH12Q9NPG4 1184 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 SEMA4GQ9NTN9 838 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 KLHL8Q9P2G9 620 aaPredicted RBP11.15□□□□□ -0.63
APTX-209ENST00000460940 EIF2B4Q9UI10 523 aaKnown RBP11.15□□□□□ -0.63
APTX-209ENST00000460940 RPL26L1Q9UNX3 145 aaKnown RBP11.15□□□□□ -0.63
APTX-209ENST00000460940 PCDHGC4Q9Y5F7 938 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 RAI2Q9Y5P3 530 aa11.15□□□□□ -0.63
APTX-209ENST00000460940 PTPRZ1P23471 2315 aaPredicted RBP11.14□□□□□ -0.63
APTX-209ENST00000460940 TTC24A2A3L6 582 aaPredicted RBP11.14□□□□□ -0.63
APTX-209ENST00000460940 CFAP69A5D8W1 941 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 BCAT2O15382 392 aaPredicted RBP11.14□□□□□ -0.63
APTX-209ENST00000460940 AFF3P51826 1226 aaKnown RBP11.14□□□□□ -0.63
APTX-209ENST00000460940 NIPAL4Q0D2K0 466 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 SPEM2Q0P670 501 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 RBBP5Q15291 538 aaKnown RBP11.14□□□□□ -0.63
APTX-209ENST00000460940 ZNF284Q2VY69 593 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 TMEM52BQ4KMG9 183 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 ITPRIPL1Q6GPH6 555 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 NAPEPLDQ6IQ20 393 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 DARS2Q6PI48 645 aaKnown RBP11.14□□□□□ -0.63
APTX-209ENST00000460940 SLC23A3Q6PIS1 610 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 ZNF572Q7Z3I7 529 aaPredicted RBP11.14□□□□□ -0.63
APTX-209ENST00000460940 ZSWIM9Q86XI8 627 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 NDUFAF2Q8N183 169 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 ZCCHC9Q8N567 271 aaKnown RBP11.14□□□□□ -0.63
APTX-209ENST00000460940 C1orf216Q8TAB5 229 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 SLC35B2Q8TB61 432 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 CXorf40AQ8TE69 158 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 ASB12Q8WXK4 309 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 RSRC1Q96IZ7 334 aaKnown RBP11.14□□□□□ -0.63
APTX-209ENST00000460940 PBKQ96KB5 322 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 PPP1R2P1Q96PQ5 205 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 ORAI3Q9BRQ5 295 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 CEP41Q9BYV8 373 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 MIR1-1HGQ9H1L0 117 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 PHTF1Q9UMS5 762 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 PCDHB9Q9Y5E1 797 aa11.14□□□□□ -0.63
APTX-209ENST00000460940 GON4LQ3T8J9 2241 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 TCRBV7S2A1N4TA0A589 114 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 KHNYNO15037 678 aaKnown RBP11.13□□□□□ -0.63
APTX-209ENST00000460940 FZD6O60353 706 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 SNUPNO95149 360 aaKnown RBP11.13□□□□□ -0.63
APTX-209ENST00000460940 RBL1P28749 1068 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 LSP1P33241 339 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 CD86P42081 329 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 RACK1P63244 317 aaKnown RBP11.13□□□□□ -0.63
APTX-209ENST00000460940 TEAD4Q15561 434 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 EMBQ6PCB8 327 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 USP45Q70EL2 814 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 DPPA4Q7L190 304 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 ZNF567Q8N184 647 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 MMGT1Q8N4V1 131 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 PDCD6IPQ8WUM4 868 aaKnown RBP11.13□□□□□ -0.63
APTX-209ENST00000460940 CAVIN3Q969G5 261 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 TADA1Q96BN2 335 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 MCCC1Q96RQ3 725 aaPredicted RBP11.13□□□□□ -0.63
APTX-209ENST00000460940 C1QTNF7Q9BXJ2 289 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 NUSAP1Q9BXS6 441 aaKnown RBP11.13□□□□□ -0.63
APTX-209ENST00000460940 TM9SF3Q9HD45 589 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 PARD6AQ9NPB6 346 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 TMEM74BQ9NUR3 256 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 DNPEPQ9ULA0 475 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 SLC6A14Q9UN76 642 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 ZFR2Q9UPR6 939 aaKnown RBP11.13□□□□□ -0.63
APTX-209ENST00000460940 ITM2BQ9Y287 266 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 R3HDM2Q9Y2K5 976 aaKnown RBP11.13□□□□□ -0.63
APTX-209ENST00000460940 SAR1BQ9Y6B6 198 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 CEP192Q8TEP8 1941 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 CACNA1EQ15878 2313 aa11.13□□□□□ -0.63
APTX-209ENST00000460940 PRAMEF26H0Y7S4 382 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 CES2O00748 559 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 ENC1O14682 589 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 KCNN4O15554 427 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 CEP104O60308 925 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 OPHN1O60890 802 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 FGGP02679 453 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 MMP2P08253 660 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 CYP2A6P11509 494 aaPredicted RBP11.12□□□□□ -0.63
APTX-209ENST00000460940 TGM1P22735 817 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 MAOBP27338 520 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 AKT2P31751 481 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 GCKP35557 465 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 GRIA4P48058 902 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 TTMPQ5BVD1 217 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 TRIM61Q5EBN2 209 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 LRRC73Q5JTD7 316 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 SEL1L3Q68CR1 1132 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 PRR23CQ6ZRP0 262 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 RINLQ6ZS11 566 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 DCLK2Q8N568 766 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 C12orf50Q8NA57 414 aaPredicted RBP11.12□□□□□ -0.63
APTX-209ENST00000460940 DENND6BQ8NEG7 585 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 FAM174AQ8TBP5 190 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms