RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 GGT7Q9UJ14 662 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 ATXN2Q99700 1313 aaKnown RBP22.55■■□□□ 1.2
C9orf3-209ENST00000460573 C4orf47A7E2U8 309 aa22.54■■□□□ 1.2
C9orf3-209ENST00000460573 PHF2O75151 1096 aa22.54■■□□□ 1.2
C9orf3-209ENST00000460573 TM7SF2O76062 418 aa22.54■■□□□ 1.2
C9orf3-209ENST00000460573 CFIP05156 583 aa22.54■■□□□ 1.2
C9orf3-209ENST00000460573 ZNF30P17039 623 aa22.54■■□□□ 1.2
C9orf3-209ENST00000460573 ITIH2P19823 946 aa22.54■■□□□ 1.2
C9orf3-209ENST00000460573 MAT2AP31153 395 aaKnown RBP22.54■■□□□ 1.2
C9orf3-209ENST00000460573 VIPR1P32241 457 aa22.54■■□□□ 1.2
C9orf3-209ENST00000460573 FDFT1P37268 417 aa22.54■■□□□ 1.2
C9orf3-209ENST00000460573 COILP38432 576 aaPredicted RBP22.54■■□□□ 1.2
C9orf3-209ENST00000460573 KCNJ1P48048 391 aa22.54■■□□□ 1.2
C9orf3-209ENST00000460573 SGCGQ13326 291 aa22.54■■□□□ 1.2
C9orf3-209ENST00000460573 UAP1L1Q3KQV9 507 aa22.54■■□□□ 1.2
C9orf3-209ENST00000460573 CCDC137Q6PK04 289 aaKnown RBP22.54■■□□□ 1.2
C9orf3-209ENST00000460573 KLHDC8BQ8IXV7 354 aa22.54■■□□□ 1.2
C9orf3-209ENST00000460573 GRK7Q8WTQ7 553 aa22.54■■□□□ 1.2
C9orf3-209ENST00000460573 MRGPRX2Q96LB1 330 aa22.54■■□□□ 1.2
C9orf3-209ENST00000460573 LYSMD1Q96S90 227 aa22.54■■□□□ 1.2
C9orf3-209ENST00000460573 FSD1LQ9BXM9 530 aa22.54■■□□□ 1.2
C9orf3-209ENST00000460573 SPTBN2O15020 2390 aa22.54■■□□□ 1.2
C9orf3-209ENST00000460573 LNP1A1A4G5 178 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 IGLON5A6NGN9 336 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 CAPN8A6NHC0 703 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 PATE3B3GLJ2 98 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 PSMD11O00231 422 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 MMP20O60882 483 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 PRKCGP05129 697 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 ADRB1P08588 477 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 ELFN1P0C7U0 828 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 HLA-DPA1P20036 260 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 MAOBP27338 520 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 LIG3P49916 1009 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 RACK1P63244 317 aaKnown RBP22.53■■□□□ 1.2
C9orf3-209ENST00000460573 RALGDSQ12967 914 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 ARHGEF7Q14155 803 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 QPCTQ16769 361 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 SEL1L3Q68CR1 1132 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 LIPIQ6XZB0 460 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 IPMKQ8NFU5 416 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 LENG8Q96PV6 779 aaPredicted RBP22.53■■□□□ 1.2
C9orf3-209ENST00000460573 GORASP1Q9BQQ3 440 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 ORAI3Q9BRQ5 295 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 C1QTNF7Q9BXJ2 289 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 KCTD5Q9NXV2 234 aa22.53■■□□□ 1.2
C9orf3-209ENST00000460573 DNAH14Q0VDD8 3507 aa22.52■■□□□ 1.2
C9orf3-209ENST00000460573 A0A1B0GTW7 788 aa22.52■■□□□ 1.2
C9orf3-209ENST00000460573 ERI2A8K979 691 aaKnown RBP22.52■■□□□ 1.2
C9orf3-209ENST00000460573 F5H423 210 aaPredicted RBP22.52■■□□□ 1.2
C9orf3-209ENST00000460573 PRAMEF26H0Y7S4 382 aa22.52■■□□□ 1.2
C9orf3-209ENST00000460573 CCDC188H7C350 402 aa22.52■■□□□ 1.2
C9orf3-209ENST00000460573 METTL18O95568 372 aa22.52■■□□□ 1.2
C9orf3-209ENST00000460573 CTPS1P17812 591 aa22.52■■□□□ 1.2
C9orf3-209ENST00000460573 HNF1BP35680 557 aa22.52■■□□□ 1.2
C9orf3-209ENST00000460573 AGERQ15109 404 aa22.52■■□□□ 1.2
C9orf3-209ENST00000460573 NAPEPLDQ6IQ20 393 aa22.52■■□□□ 1.2
C9orf3-209ENST00000460573 TTC27Q6P3X3 843 aa22.52■■□□□ 1.2
C9orf3-209ENST00000460573 KDELC2Q7Z4H8 507 aa22.52■■□□□ 1.2
C9orf3-209ENST00000460573 RAVER1Q8IY67 606 aaKnown RBP22.52■■□□□ 1.2
C9orf3-209ENST00000460573 C1orf216Q8TAB5 229 aa22.52■■□□□ 1.2
C9orf3-209ENST00000460573 RUNDC3BQ96NL0 473 aa22.52■■□□□ 1.2
C9orf3-209ENST00000460573 WRAP53Q9BUR4 548 aaKnown RBP22.52■■□□□ 1.2
C9orf3-209ENST00000460573 MIR1-1HGQ9H1L0 117 aa22.52■■□□□ 1.2
C9orf3-209ENST00000460573 EBF2Q9HAK2 575 aa22.52■■□□□ 1.2
C9orf3-209ENST00000460573 MAGEE1Q9HCI5 957 aa22.52■■□□□ 1.2
C9orf3-209ENST00000460573 TMEM74BQ9NUR3 256 aa22.52■■□□□ 1.2
C9orf3-209ENST00000460573 TNRC6BQ9UPQ9 1833 aaKnown RBP22.52■■□□□ 1.2
C9orf3-209ENST00000460573 NPIPB15A6NHN6 443 aaPredicted RBP22.51■■□□□ 1.19
C9orf3-209ENST00000460573 BCAT2O15382 392 aaPredicted RBP22.51■■□□□ 1.19
C9orf3-209ENST00000460573 HEXIM1O94992 359 aaKnown RBP22.51■■□□□ 1.19
C9orf3-209ENST00000460573 PAK4O96013 591 aaPredicted RBP22.51■■□□□ 1.19
C9orf3-209ENST00000460573 FGF1P05230 155 aa22.51■■□□□ 1.19
C9orf3-209ENST00000460573 C6P13671 934 aa22.51■■□□□ 1.19
C9orf3-209ENST00000460573 HNRNPA2B1P22626 353 aaKnown RBP22.51■■□□□ 1.19
C9orf3-209ENST00000460573 AKT2P31751 481 aa22.51■■□□□ 1.19
C9orf3-209ENST00000460573 GALNT3Q14435 633 aa22.51■■□□□ 1.19
C9orf3-209ENST00000460573 SLC1A5Q15758 541 aa22.51■■□□□ 1.19
C9orf3-209ENST00000460573 DUOXA1Q1HG43 343 aa22.51■■□□□ 1.19
C9orf3-209ENST00000460573 RANBP10Q6VN20 620 aa22.51■■□□□ 1.19
C9orf3-209ENST00000460573 DENND6BQ8NEG7 585 aa22.51■■□□□ 1.19
C9orf3-209ENST00000460573 FAM174AQ8TBP5 190 aa22.51■■□□□ 1.19
C9orf3-209ENST00000460573 SERAC1Q96JX3 654 aa22.51■■□□□ 1.19
C9orf3-209ENST00000460573 LRRC40Q9H9A6 602 aa22.51■■□□□ 1.19
C9orf3-209ENST00000460573 PI4KAP42356 2102 aa22.51■■□□□ 1.19
C9orf3-209ENST00000460573 SLC31A1O15431 190 aa22.5■■□□□ 1.19
C9orf3-209ENST00000460573 LZTS3O60299 673 aaPredicted RBP22.5■■□□□ 1.19
C9orf3-209ENST00000460573 GAS8O95995 478 aa22.5■■□□□ 1.19
C9orf3-209ENST00000460573 ALPIP09923 528 aa22.5■■□□□ 1.19
C9orf3-209ENST00000460573 RPL22P35268 128 aaKnown RBP22.5■■□□□ 1.19
C9orf3-209ENST00000460573 ADRA1AP35348 466 aa22.5■■□□□ 1.19
C9orf3-209ENST00000460573 NOVA1P51513 510 aaKnown RBP22.5■■□□□ 1.19
C9orf3-209ENST00000460573 IRX4P78413 519 aa22.5■■□□□ 1.19
C9orf3-209ENST00000460573 STAT4Q14765 748 aa22.5■■□□□ 1.19
C9orf3-209ENST00000460573 KCTD11Q693B1 232 aa22.5■■□□□ 1.19
C9orf3-209ENST00000460573 CRTC1Q6UUV9 634 aa22.5■■□□□ 1.19
C9orf3-209ENST00000460573 CBARPQ8N350 705 aaPredicted RBP22.5■■□□□ 1.19
C9orf3-209ENST00000460573 KLK6Q92876 244 aa22.5■■□□□ 1.19
C9orf3-209ENST00000460573 SKA1Q96BD8 255 aa22.5■■□□□ 1.19
C9orf3-209ENST00000460573 TM9SF3Q9HD45 589 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms