RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 PFKFB4Q16877 469 aa18.19■□□□□ 0.5
HPS3-202ENST00000460120 RSPO2Q6UXX9 243 aaPredicted RBP18.19■□□□□ 0.5
HPS3-202ENST00000460120 LGI2Q8N0V4 545 aa18.19■□□□□ 0.5
HPS3-202ENST00000460120 PDCD6IPQ8WUM4 868 aaKnown RBP18.19■□□□□ 0.5
HPS3-202ENST00000460120 NAT14Q8WUY8 206 aa18.19■□□□□ 0.5
HPS3-202ENST00000460120 C1orf74Q96LT6 269 aa18.19■□□□□ 0.5
HPS3-202ENST00000460120 ASB3Q9Y575 518 aa18.19■□□□□ 0.5
HPS3-202ENST00000460120 PMLP29590 882 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 DUSP4Q13115 394 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 TLR1Q15399 786 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 ZNF549Q6P9A3 640 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 PTGR2Q8N8N7 351 aaPredicted RBP18.18■□□□□ 0.5
HPS3-202ENST00000460120 BTN2A3PQ96KV6 586 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 TRIM8Q9BZR9 551 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 UPF3AQ9H1J1 476 aaKnown RBP18.18■□□□□ 0.5
HPS3-202ENST00000460120 GSTO2Q9H4Y5 243 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 EML4Q9HC35 981 aaKnown RBP18.18■□□□□ 0.5
HPS3-202ENST00000460120 APPL1Q9UKG1 709 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 KIF19Q2TAC6 998 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 C6orf52Q5T4I8 152 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 NADSYN1Q6IA69 706 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 RNF19BQ6ZMZ0 732 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 KIAA0408Q6ZU52 694 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 SETD3Q86TU7 594 aaPredicted RBP18.18■□□□□ 0.5
HPS3-202ENST00000460120 ISCA2Q86U28 154 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 DDIASQ8IXT1 998 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 TSPAN17Q96FV3 270 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 NACA2Q9H009 215 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 VPS45Q9NRW7 570 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.18■□□□□ 0.5
HPS3-202ENST00000460120 PDP2Q9P2J9 529 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 BTRCQ9Y297 605 aa18.18■□□□□ 0.5
HPS3-202ENST00000460120 FBP2O00757 339 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 OAZ2O95190 189 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 GLP2RO95838 553 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 RBP1P09455 135 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 HTR7P34969 479 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 GRIA2P42262 883 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 FOXA1P55317 472 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 NFE2Q16621 373 aaPredicted RBP18.17■□□□□ 0.5
HPS3-202ENST00000460120 NRF1Q16656 503 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 REP15Q6BDI9 236 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 SLC24A5Q71RS6 500 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 LCA5Q86VQ0 697 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 ATP13A1Q9HD20 1204 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 NLRC5Q86WI3 1866 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 ARHGEF37A1IGU5 675 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 CD3EAPO15446 510 aaKnown RBP18.17■□□□□ 0.5
HPS3-202ENST00000460120 DNAJB13P59910 316 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 ACAP2Q15057 778 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 TRIM71Q2Q1W2 868 aaKnown RBP18.17■□□□□ 0.5
HPS3-202ENST00000460120 IL23RQ5VWK5 629 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 ABI1Q8IZP0 508 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 RMDN1Q96DB5 314 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 UBXN10Q96LJ8 280 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 ARNT2Q9HBZ2 717 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 PAPOLBQ9NRJ5 636 aaKnown RBP18.17■□□□□ 0.5
HPS3-202ENST00000460120 ABT1Q9ULW3 272 aaKnown RBP18.17■□□□□ 0.5
HPS3-202ENST00000460120 PCDHGA7Q9Y5G6 932 aa18.17■□□□□ 0.5
HPS3-202ENST00000460120 H3BMM5 538 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 RPL17P18621 184 aaKnown RBP18.16■□□□□ 0.5
HPS3-202ENST00000460120 FMO4P31512 558 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 POLD2P49005 469 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 SCNN1BP51168 640 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 ECT2LQ008S8 904 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 OR4D1Q15615 310 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 OGFRL1Q5TC84 451 aaPredicted RBP18.16■□□□□ 0.5
HPS3-202ENST00000460120 MSANTD2Q6P1R3 559 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 ST13P4Q8IZP2 240 aaPredicted RBP18.16■□□□□ 0.5
HPS3-202ENST00000460120 PELI3Q8N2H9 469 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 LRCH3Q96II8 777 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 MAELQ96JY0 434 aaKnown RBP18.16■□□□□ 0.5
HPS3-202ENST00000460120 PPP1R2P1Q96PQ5 205 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 POLR1EQ9GZS1 481 aaKnown RBP18.16■□□□□ 0.5
HPS3-202ENST00000460120 MID1IP1Q9NPA3 183 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 MROH6A6NGR9 719 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 TLR5O60602 858 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 GFAPP14136 432 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 CDKN1CP49918 316 aaPredicted RBP18.16■□□□□ 0.5
HPS3-202ENST00000460120 HK2P52789 917 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 DSC1Q08554 894 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 SERINC3Q13530 473 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 RARS2Q5T160 578 aaKnown RBP18.16■□□□□ 0.5
HPS3-202ENST00000460120 MAP3K21Q5TCX8 1036 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 PRSS55Q6UWB4 352 aaPredicted RBP18.16■□□□□ 0.5
HPS3-202ENST00000460120 CCDC117Q8IWD4 279 aaPredicted RBP18.16■□□□□ 0.5
HPS3-202ENST00000460120 AFAP1L2Q8N4X5 818 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 PIP4K2CQ8TBX8 421 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 TRPC4APQ8TEL6 797 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 ZNF483Q8TF39 744 aaPredicted RBP18.16■□□□□ 0.5
HPS3-202ENST00000460120 ESAMQ96AP7 390 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 MFSD1Q9H3U5 465 aa18.16■□□□□ 0.5
HPS3-202ENST00000460120 C15orf38-AP3S2A0A0A6YYH1 394 aa18.15■□□□□ 0.5
HPS3-202ENST00000460120 A0A1B0GTL3 188 aa18.15■□□□□ 0.5
HPS3-202ENST00000460120 WASH4PA8MWX3 477 aa18.15■□□□□ 0.5
HPS3-202ENST00000460120 SLC7A4O43246 635 aa18.15■□□□□ 0.5
HPS3-202ENST00000460120 RNASEH2AO75792 299 aaKnown RBP18.15■□□□□ 0.5
HPS3-202ENST00000460120 MYCP01106 439 aaPredicted RBP18.15■□□□□ 0.5
HPS3-202ENST00000460120 NELFEP18615 380 aaKnown RBP18.15■□□□□ 0.5
HPS3-202ENST00000460120 RGRP47804 291 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms