RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 UBQLN1Q9UMX0 589 aaKnown RBP9.79□□□□□ -0.84
UFD1-205ENST00000459854 PLCL2Q9UPR0 1127 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 TSPAN4O14817 238 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 AVILO75366 819 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 ASLP04424 464 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 MZF1P28698 734 aaPredicted RBP9.79□□□□□ -0.84
UFD1-205ENST00000459854 GPC1P35052 558 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 ACOT2P49753 483 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 CLCN3P51790 818 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 SMCO1Q147U7 214 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 DCAF6Q58WW2 860 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 TXNDC11Q6PKC3 985 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 CHSY1Q86X52 802 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 WDR49Q8IV35 697 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 ANKLE1Q8NAG6 615 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 IPCEF1Q8WWN9 437 aaPredicted RBP9.79□□□□□ -0.84
UFD1-205ENST00000459854 HTRA1Q92743 480 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 CENPNQ96H22 339 aaPredicted RBP9.79□□□□□ -0.84
UFD1-205ENST00000459854 TEFMQ96QE5 360 aaKnown RBP9.79□□□□□ -0.84
UFD1-205ENST00000459854 HSD17B14Q9BPX1 270 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 MRPL57Q9BQC6 102 aaKnown RBP9.79□□□□□ -0.84
UFD1-205ENST00000459854 OSBPL7Q9BZF2 842 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 MCOLN1Q9GZU1 580 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 TMEM138Q9NPI0 162 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 PADI4Q9UM07 663 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 G3V2T6 193 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 FSCN2O14926 492 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 CHP2O43745 196 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 CST1P01037 141 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 SPATA19Q7Z5L4 167 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 C11orf74Q86VG3 221 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 ECHDC2Q86YB7 292 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 KAT2BQ92831 832 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 ACAT2Q9BWD1 397 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 GSDMCQ9BYG8 508 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 IL22Q9GZX6 179 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 SLC22A4Q9H015 551 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 RERGLQ9H628 205 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 KAT8Q9H7Z6 458 aaKnown RBP9.78□□□□□ -0.84
UFD1-205ENST00000459854 MED11Q9P086 117 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 SAMD4AQ9UPU9 718 aaKnown RBP9.78□□□□□ -0.84
UFD1-205ENST00000459854 TEX28O15482 410 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 ERBB2P04626 1255 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 NTRK1P04629 796 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 LTA4HP09960 611 aaKnown RBP9.78□□□□□ -0.84
UFD1-205ENST00000459854 COL6A2P12110 1019 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 BCAT1P54687 386 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 TMEM119Q4V9L6 283 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 RBM48Q5RL73 367 aaKnown RBP9.78□□□□□ -0.84
UFD1-205ENST00000459854 CNSTQ6PJW8 725 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 NUDT18Q6ZVK8 323 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 DNAJB7Q7Z6W7 309 aaPredicted RBP9.78□□□□□ -0.84
UFD1-205ENST00000459854 TMEM199Q8N511 208 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 PCDH20Q8N6Y1 951 aaKnown RBP9.78□□□□□ -0.84
UFD1-205ENST00000459854 PJA1Q8NG27 643 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 ZNF420Q8TAQ5 688 aaPredicted RBP9.78□□□□□ -0.84
UFD1-205ENST00000459854 ZC3H10Q96K80 434 aaKnown RBP9.78□□□□□ -0.84
UFD1-205ENST00000459854 ACTR8Q9H981 624 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 ABCG2Q9UNQ0 655 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 PIN4Q9Y237 131 aaKnown RBP9.78□□□□□ -0.84
UFD1-205ENST00000459854 LRRC42Q9Y546 428 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 MAFBQ9Y5Q3 323 aaPredicted RBP9.78□□□□□ -0.84
UFD1-205ENST00000459854 TRPV2Q9Y5S1 764 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 BNIP3LO60238 219 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 RNASEH1O60930 286 aaKnown RBP9.78□□□□□ -0.84
UFD1-205ENST00000459854 APOC1P02654 83 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 ERCC2P18074 760 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 CCR3P51677 355 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 CLCN5P51795 746 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 GNG2P59768 71 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 MVKQ03426 396 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 SKIV2LQ15477 1246 aaKnown RBP9.78□□□□□ -0.84
UFD1-205ENST00000459854 STK40Q8N2I9 435 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 SMYD1Q8NB12 490 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 GSTCDQ8NEC7 633 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 FAM172AQ8WUF8 416 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 DUSP9Q99956 384 aaKnown RBP9.78□□□□□ -0.84
UFD1-205ENST00000459854 AASSQ9UDR5 926 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 VPS4AQ9UN37 437 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 ST3GAL5Q9UNP4 418 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 ZNF879B4DU55 563 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 OGTO15294 1046 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 NFKB1P19838 968 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 FGFR3P22607 806 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 NR4A1P22736 598 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 CYP2F1P24903 491 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 ARHGDIBP52566 201 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 SLC5A3P53794 718 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 CDK18Q07002 472 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 TMEM62Q0P6H9 643 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 CDC16Q13042 620 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 SWI5Q1ZZU3 235 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 ATF7IP2Q5U623 682 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 LMBRD2Q68DH5 695 aaPredicted RBP9.78□□□□□ -0.84
UFD1-205ENST00000459854 SPESP1Q6UW49 350 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 ZNF572Q7Z3I7 529 aaPredicted RBP9.78□□□□□ -0.84
UFD1-205ENST00000459854 C4orf32Q8N8J7 132 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 DNAJB3Q8WWF6 145 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 ACOT12Q8WYK0 555 aa9.78□□□□□ -0.84
UFD1-205ENST00000459854 TOP1MTQ969P6 601 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms