RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	SNX1	Q13596	522 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	AGER	Q15109	404 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	IRF4	Q15306	451 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	AASDH	Q4L235	1098 aa	Predicted RBP	10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	LRRC66	Q68CR7	880 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	KCTD16	Q68DU8	428 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	ERAP2	Q6P179	960 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	MINDY1	Q8N5J2	469 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	PRELID2	Q8N945	189 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	MFSD2A	Q8NA29	543 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	C12orf50	Q8NA57	414 aa	Predicted RBP	10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	TTC13	Q8NBP0	860 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	CXorf40A	Q8TE69	158 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	RTP4	Q96DX8	246 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	LENG8	Q96PV6	779 aa	Predicted RBP	10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	NUSAP1	Q9BXS6	441 aa	Known RBP	10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	KCND1	Q9NSA2	647 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	TRHDE	Q9UKU6	1024 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	TPX2	Q9ULW0	747 aa	Known RBP	10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	FNDC3A	Q9Y2H6	1198 aa	Known RBP	10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	CEP250	Q9BV73	2442 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	WDR87	Q6ZQQ6	2873 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	FRYL	O94915	3013 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	CACNA1E	Q15878	2313 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	LOC285095	A0A1B0GVY8	99 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783		A0A1W2PQ67	120 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	CFAP69	A5D8W1	941 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	C5orf60	A6NFR6	353 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	C4orf47	A7E2U8	309 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	PRR5-ARHGAP8	B1AHC4	643 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	ANKRD66	B4E2M5	251 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	TLR4	O00206	839 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	AURKA	O14965	403 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	KIF5C	O60282	957 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	ELFN1	P0C7U0	828 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	AKT2	P31751	481 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	ETV3	P41162	512 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	STC1	P52823	247 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	PFN3	P60673	137 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	RPL26	P61254	145 aa	Known RBP	10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	POLR2L	P62875	67 aa	Known RBP	10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	PTS	Q03393	145 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	CDK18	Q07002	472 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	MSLN	Q13421	630 aa	Predicted RBP	10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	ZNF423	Q2M1K9	1284 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	HLA-B	Q31612	363 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	FAXC	Q5TGI0	409 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	STPG1	Q5TH74	334 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	TTC27	Q6P3X3	843 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	KYAT3	Q6YP21	454 aa	Known RBP	10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783		Q6ZVL8	140 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	TECPR1	Q7Z6L1	1165 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	RABEPK	Q7Z6M1	372 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	TAB3	Q8N5C8	712 aa	Predicted RBP	10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	GPR161	Q8N6U8	529 aa	Known RBP	10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	DENND6B	Q8NEG7	585 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	IPMK	Q8NFU5	416 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	RMDN1	Q96DB5	314 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	LYSMD1	Q96S90	227 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	OSBPL9	Q96SU4	736 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	GTPBP2	Q9BX10	602 aa	Known RBP	10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	DNAAF2	Q9NVR5	837 aa	Known RBP	10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	FAM153A	Q9UHL3	310 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	RSPH14	Q9UHP6	348 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	SNX12	Q9UMY4	172 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	RPL26L1	Q9UNX3	145 aa	Known RBP	10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	ADAMTS9	Q9P2N4	1935 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	LRRK1	Q38SD2	2015 aa		10.28	□□□□□ -0.76
MRPL55-223	ENST00000459783	OPHN1	O60890	802 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	GCAT	O75600	419 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	CLDN7	O95471	211 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	NDST3	O95803	873 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	SOD1	P00441	154 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	AGT	P01019	485 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	ZSCAN5DP	P0CG00	497 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	THEGL	P0DJG4	465 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	CD59	P13987	128 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	KCNJ1	P48048	391 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	LIMK1	P53667	647 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	GNG11	P61952	73 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	SGCG	Q13326	291 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	FZD2	Q14332	565 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	SPARCL1	Q14515	664 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	STAT4	Q14765	748 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	TEAD4	Q15561	434 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	CCNG2	Q16589	344 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	LONRF2	Q1L5Z9	754 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	RSPO4	Q2I0M5	234 aa	Predicted RBP	10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	SIRPB2	Q5JXA9	342 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	DENND2C	Q68D51	928 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	KCTD11	Q693B1	232 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	DENND5A	Q6IQ26	1287 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	DRICH1	Q6PGQ1	229 aa	Predicted RBP	10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783		Q6ZSR6	202 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	MICALCL	Q6ZW33	695 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	USP45	Q70EL2	814 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	KANSL1	Q7Z3B3	1105 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	LYSMD3	Q7Z3D4	306 aa		10.27	□□□□□ -0.77
MRPL55-223	ENST00000459783	IQCH	Q86VS3	1027 aa		10.27	□□□□□ -0.77

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