RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 SPECC1LQ69YQ0 1117 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 DPPA4Q7L190 304 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 SFTPA2Q8IWL1 248 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 Q8N9G6 341 aaPredicted RBP10.47□□□□□ -0.73
HDLBP-227ENST00000458564 ZSCAN1Q8NBB4 408 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 TSEN2Q8NCE0 465 aaKnown RBP10.47□□□□□ -0.73
HDLBP-227ENST00000458564 KIAA1524Q8TCG1 905 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 HTR3CQ8WXA8 447 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 USP7Q93009 1102 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 EIF3CQ99613 913 aaKnown RBP10.47□□□□□ -0.73
HDLBP-227ENST00000458564 CNPY3Q9BT09 278 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 FUCA2Q9BTY2 467 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 TMEM168Q9H0V1 697 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 WDR26Q9H7D7 661 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 FAM207AQ9NSI2 230 aaPredicted RBP10.47□□□□□ -0.73
HDLBP-227ENST00000458564 PCDHB11Q9Y5F2 797 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 FLNCQ14315 2725 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 LRRK2Q5S007 2527 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 PRSS38A1L453 326 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 ANKRD62A6NC57 917 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 PDE2AO00408 941 aaPredicted RBP10.46□□□□□ -0.73
HDLBP-227ENST00000458564 TRAFD1O14545 582 aaPredicted RBP10.46□□□□□ -0.73
HDLBP-227ENST00000458564 PPFIA2O75334 1257 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 MYCLP1P12525 358 aaPredicted RBP10.46□□□□□ -0.73
HDLBP-227ENST00000458564 WT1P19544 449 aaPredicted RBP10.46□□□□□ -0.73
HDLBP-227ENST00000458564 KLK7P49862 253 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 TPI1P60174 286 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 RPL7AP62424 266 aaKnown RBP10.46□□□□□ -0.73
HDLBP-227ENST00000458564 POLR2LP62875 67 aaKnown RBP10.46□□□□□ -0.73
HDLBP-227ENST00000458564 NSUN2Q08J23 767 aaKnown RBP eCLIP10.46□□□□□ -0.73
HDLBP-227ENST00000458564 RFTN1Q14699 578 aaPredicted RBP10.46□□□□□ -0.73
HDLBP-227ENST00000458564 C16orf72Q14CZ0 275 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 TBR1Q16650 682 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 MAP9Q49MG5 647 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 TMEM164Q5U3C3 297 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 CDKAL1Q5VV42 579 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 DNAJC24Q6P3W2 148 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 SCYL2Q6P3W7 929 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 SRLQ86TD4 932 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 VASH2Q86V25 355 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 PIM3Q86V86 326 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 ZFAND4Q86XD8 727 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 CCL4L1Q8NHW4 92 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 GPBAR1Q8TDU6 330 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 MCEEQ96PE7 176 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 LGR4Q9BXB1 951 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 TRIM4Q9C037 500 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 SEMA6CQ9H3T2 930 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 DPEP2Q9H4A9 486 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 NLRC4Q9NPP4 1024 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 MRPL40Q9NQ50 206 aaKnown RBP10.46□□□□□ -0.73
HDLBP-227ENST00000458564 WDR70Q9NW82 654 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 GEMIN8Q9NWZ8 242 aaKnown RBP10.46□□□□□ -0.73
HDLBP-227ENST00000458564 KCTD5Q9NXV2 234 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 TAB2Q9NYJ8 693 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 AKAP7Q9P0M2 348 aaPredicted RBP10.46□□□□□ -0.73
HDLBP-227ENST00000458564 SIK3Q9Y2K2 1263 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 PCDHGA3Q9Y5H0 932 aa10.46□□□□□ -0.73
HDLBP-227ENST00000458564 ANKRD36A6QL64 1941 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 ARHGAP42A6NI28 874 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 STMND1H3BQB6 276 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 ZW10O43264 779 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 B4GAT1O43505 415 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 PALMO75781 387 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 PRKCGP05129 697 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 CCNB1P14635 433 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 GPR3P46089 330 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 PAPOLAP51003 745 aaKnown RBP10.45□□□□□ -0.74
HDLBP-227ENST00000458564 MAPK10P53779 464 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 AP1S1P61966 158 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 BCL2L1Q07817 233 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 TRA2AQ13595 282 aaKnown RBP eCLIP10.45□□□□□ -0.74
HDLBP-227ENST00000458564 KRT31Q15323 416 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 PHF19Q5T6S3 580 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 PNCKQ6P2M8 343 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 ARHGAP12Q8IWW6 846 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 ENOX1Q8TC92 643 aaKnown RBP10.45□□□□□ -0.74
HDLBP-227ENST00000458564 CELF6Q96J87 481 aaKnown RBP10.45□□□□□ -0.74
HDLBP-227ENST00000458564 COQ10AQ96MF6 247 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 PSKH2Q96QS6 385 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 SLC39A8Q9C0K1 460 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 SLC25A18Q9H1K4 315 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 ADNPQ9H2P0 1102 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 RDH14Q9HBH5 336 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 CYP4F12Q9HCS2 524 aa10.45□□□□□ -0.74
HDLBP-227ENST00000458564 TRNAU1APQ9NX07 287 aaKnown RBP10.45□□□□□ -0.74
HDLBP-227ENST00000458564 SPENQ96T58 3664 aaKnown RBP10.45□□□□□ -0.74
HDLBP-227ENST00000458564 ARHGEF17Q96PE2 2063 aaPredicted RBP10.45□□□□□ -0.74
HDLBP-227ENST00000458564 SDK2Q58EX2 2172 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 IGHV5-10-1A0A0J9YXX1 117 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 A0A1W2PQ67 120 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 HTRA2O43464 458 aaPredicted RBP10.44□□□□□ -0.74
HDLBP-227ENST00000458564 DESP17661 470 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 TEAD1P28347 426 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 ARSDP51689 593 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 MAZP56270 477 aaKnown RBP10.44□□□□□ -0.74
HDLBP-227ENST00000458564 NFKB2Q00653 900 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 OGDHQ02218 1023 aa10.44□□□□□ -0.74
HDLBP-227ENST00000458564 SRSF1Q07955 248 aaKnown RBP eCLIP10.44□□□□□ -0.74
HDLBP-227ENST00000458564 IL10RBQ08334 325 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms