RNA–Protein interactions for RNA: ENST00000458499.5

VGLL4-215, Transcript of vestigial like family member 4, human

TSL 3

Gene VGLL4, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VGLL4-215	ENST00000458499	ARRDC2	Q8TBH0	407 aa		14	□□□□□ -0.17
VGLL4-215	ENST00000458499	PIH1D2	Q8WWB5	315 aa		14	□□□□□ -0.17
VGLL4-215	ENST00000458499	TSACC	Q96A04	125 aa	Predicted RBP	14	□□□□□ -0.17
VGLL4-215	ENST00000458499	SCRN2	Q96FV2	425 aa		14	□□□□□ -0.17
VGLL4-215	ENST00000458499	PANX2	Q96RD6	677 aa		14	□□□□□ -0.17
VGLL4-215	ENST00000458499	MCCC1	Q96RQ3	725 aa	Predicted RBP	14	□□□□□ -0.17
VGLL4-215	ENST00000458499	GOLPH3	Q9H4A6	298 aa		14	□□□□□ -0.17
VGLL4-215	ENST00000458499	HAUS2	Q9NVX0	235 aa		14	□□□□□ -0.17
VGLL4-215	ENST00000458499	DDX56	Q9NY93	547 aa	Known RBP	14	□□□□□ -0.17
VGLL4-215	ENST00000458499	KL	Q9UEF7	1012 aa		14	□□□□□ -0.17
VGLL4-215	ENST00000458499	ALG6	Q9Y672	507 aa		14	□□□□□ -0.17
VGLL4-215	ENST00000458499		U3KQA8	63 aa		14	□□□□□ -0.17
VGLL4-215	ENST00000458499	TPR	P12270	2363 aa	Known RBP	14	□□□□□ -0.17
VGLL4-215	ENST00000458499		A0A0U1RQS6	177 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	FZD6	O60353	706 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	KRT37	O76014	449 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	JCHAIN	P01591	159 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	CELA2B	P08218	269 aa	Predicted RBP	13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	CYP2A6	P11509	494 aa	Predicted RBP	13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	JUP	P14923	745 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	TSHR	P16473	764 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	CES1	P23141	567 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	CYLC1	P35663	651 aa	Predicted RBP	13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	HNF1B	P35680	557 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	ETV3	P41162	512 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	HK3	P52790	923 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	HADHB	P55084	474 aa	Known RBP	13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	SRP54	P61011	504 aa	Known RBP	13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	PPID	Q08752	370 aa	Known RBP	13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	NIPAL4	Q0D2K0	466 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	ZBTB17	Q13105	803 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	CAMK2B	Q13554	666 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	TCEA2	Q15560	299 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	CDKN3	Q16667	212 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	FAM182A	Q5T1J6	154 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	KCTD16	Q68DU8	428 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	PNCK	Q6P2M8	343 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	MFSD7	Q6UXD7	560 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	TSPAN33	Q86UF1	283 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	PELI3	Q8N2H9	469 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	FUBP1	Q96AE4	644 aa	Known RBP	13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	NUS1	Q96E22	293 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	TBATA	Q96M53	351 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	WDR92	Q96MX6	357 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	SMIM14	Q96QK8	99 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	IL12RB2	Q99665	862 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	CLPB	Q9H078	707 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	AMACR	Q9UHK6	382 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	CHKB	Q9Y259	395 aa		13.99	□□□□□ -0.17
VGLL4-215	ENST00000458499	CHD8	Q9HCK8	2581 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	TRABD2B	A6NFA1	517 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	CACNB4	O00305	520 aa	Predicted RBP	13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	TPP1	O14773	563 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	RASGRP1	O95267	797 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	NDUFA10	O95299	355 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	CAPNS1	P04632	268 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	ANXA6	P08133	673 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	ZFX	P17010	805 aa	Predicted RBP	13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	CDKN2B	P42772	138 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	BLK	P51451	505 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	DUSP3	P51452	185 aa	Predicted RBP	13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	EPHB1	P54762	984 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	KIAA1024L	P59773	190 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	E2F1	Q01094	437 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	INSM1	Q01101	510 aa	Predicted RBP	13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	AP1B1	Q10567	949 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	ARHGEF7	Q14155	803 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	PDK1	Q15118	436 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	LLGL1	Q15334	1064 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	ESRP1	Q6NXG1	681 aa	Known RBP	13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	TMTC1	Q8IUR5	882 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	NDUFAF2	Q8N183	169 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	CBARP	Q8N350	705 aa	Predicted RBP	13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	ATL2	Q8NHH9	583 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	MDM1	Q8TC05	714 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	PDXP	Q96GD0	296 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	LGR4	Q9BXB1	951 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	TDRD1	Q9BXT4	1180 aa	Known RBP	13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	CCDC86	Q9H6F5	360 aa	Known RBP	13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	WDR26	Q9H7D7	661 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	USP29	Q9HBJ7	922 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	LUC7L	Q9NQ29	371 aa	Known RBP	13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	SALL4	Q9UJQ4	1053 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499	PPIL1	Q9Y3C6	166 aa		13.98	□□□□□ -0.17
VGLL4-215	ENST00000458499		A0A0A6YYK5	440 aa	Predicted RBP	13.97	□□□□□ -0.17
VGLL4-215	ENST00000458499	CPED1	A4D0V7	1026 aa		13.97	□□□□□ -0.17
VGLL4-215	ENST00000458499	TMEM202	A6NGA9	273 aa		13.97	□□□□□ -0.17
VGLL4-215	ENST00000458499	LMO7DN	F2Z398	122 aa		13.97	□□□□□ -0.17
VGLL4-215	ENST00000458499	PSMD11	O00231	422 aa		13.97	□□□□□ -0.17
VGLL4-215	ENST00000458499	TAF4	O00268	1085 aa		13.97	□□□□□ -0.17
VGLL4-215	ENST00000458499	YY2	O15391	372 aa		13.97	□□□□□ -0.17
VGLL4-215	ENST00000458499	PSTPIP1	O43586	416 aa		13.97	□□□□□ -0.17
VGLL4-215	ENST00000458499	PRL	P01236	227 aa		13.97	□□□□□ -0.17
VGLL4-215	ENST00000458499	KRT10	P13645	584 aa		13.97	□□□□□ -0.17
VGLL4-215	ENST00000458499	CTSE	P14091	401 aa		13.97	□□□□□ -0.17
VGLL4-215	ENST00000458499	CA4	P22748	312 aa		13.97	□□□□□ -0.17
VGLL4-215	ENST00000458499	FECH	P22830	423 aa		13.97	□□□□□ -0.17
VGLL4-215	ENST00000458499	TRIM23	P36406	574 aa		13.97	□□□□□ -0.17
VGLL4-215	ENST00000458499	MARCKSL1	P49006	195 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms