RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 CNGA3Q16281 694 aa8.53□□□□□ -1.04
SP140-207ENST00000456542 UAP1L1Q3KQV9 507 aa8.53□□□□□ -1.04
SP140-207ENST00000456542 DBX2Q6ZNG2 339 aa8.53□□□□□ -1.04
SP140-207ENST00000456542 B4GALNT4Q76KP1 1039 aa8.53□□□□□ -1.04
SP140-207ENST00000456542 SPATS2Q86XZ4 545 aaKnown RBP8.53□□□□□ -1.04
SP140-207ENST00000456542 RAVER1Q8IY67 606 aaKnown RBP8.53□□□□□ -1.04
SP140-207ENST00000456542 ZNF567Q8N184 647 aa8.53□□□□□ -1.04
SP140-207ENST00000456542 CBARPQ8N350 705 aaPredicted RBP8.53□□□□□ -1.04
SP140-207ENST00000456542 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.53□□□□□ -1.04
SP140-207ENST00000456542 TP53I13Q8NBR0 393 aaPredicted RBP8.53□□□□□ -1.04
SP140-207ENST00000456542 OR13H1Q8NG92 308 aa8.53□□□□□ -1.04
SP140-207ENST00000456542 IFT43Q96FT9 208 aa8.53□□□□□ -1.04
SP140-207ENST00000456542 FCRL5Q96RD9 977 aa8.53□□□□□ -1.04
SP140-207ENST00000456542 TRIB3Q96RU7 358 aa8.53□□□□□ -1.04
SP140-207ENST00000456542 LYSMD1Q96S90 227 aa8.53□□□□□ -1.04
SP140-207ENST00000456542 ADGRE3Q9BY15 652 aa8.53□□□□□ -1.04
SP140-207ENST00000456542 CEP41Q9BYV8 373 aa8.53□□□□□ -1.04
SP140-207ENST00000456542 IL21RQ9HBE5 538 aa8.53□□□□□ -1.04
SP140-207ENST00000456542 PCDH9Q9HC56 1237 aa8.53□□□□□ -1.04
SP140-207ENST00000456542 KLHL8Q9P2G9 620 aaPredicted RBP8.53□□□□□ -1.04
SP140-207ENST00000456542 CHKBQ9Y259 395 aa8.53□□□□□ -1.04
SP140-207ENST00000456542 CA5BQ9Y2D0 317 aa8.53□□□□□ -1.04
SP140-207ENST00000456542 FNDC3AQ9Y2H6 1198 aaKnown RBP8.53□□□□□ -1.04
SP140-207ENST00000456542 CFAP54Q96N23 3096 aa8.53□□□□□ -1.04
SP140-207ENST00000456542 SPTY2D1-AS1A0A0U1RR47 76 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 NPIPB15A6NHN6 443 aaPredicted RBP8.52□□□□□ -1.05
SP140-207ENST00000456542 ANKRD66B4E2M5 251 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 FLRT2O43155 660 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 RECQL5O94762 991 aaPredicted RBP8.52□□□□□ -1.05
SP140-207ENST00000456542 STK10O94804 968 aaKnown RBP8.52□□□□□ -1.05
SP140-207ENST00000456542 GM2AP17900 193 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 NFKB1P19838 968 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 LHCGRP22888 699 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 RBL1P28749 1068 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 EPHA8P29322 1005 aaPredicted RBP8.52□□□□□ -1.05
SP140-207ENST00000456542 HNF1BP35680 557 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 RXRGP48443 463 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 CDK18Q07002 472 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 MTM1Q13496 603 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 ARHGEF7Q14155 803 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 SUZ12Q15022 739 aaKnown RBP8.52□□□□□ -1.05
SP140-207ENST00000456542 IRF4Q15306 451 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 WSCD2Q2TBF2 565 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 ITPRIPL1Q6GPH6 555 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 DARS2Q6PI48 645 aaKnown RBP8.52□□□□□ -1.05
SP140-207ENST00000456542 Q6ZSR6 202 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 PID1Q7Z2X4 250 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 PTAR1Q7Z6K3 402 aaPredicted RBP8.52□□□□□ -1.05
SP140-207ENST00000456542 PIP4P1Q86T03 277 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 PARGQ86W56 976 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 SLC13A5Q86YT5 568 aaPredicted RBP8.52□□□□□ -1.05
SP140-207ENST00000456542 REXO1L1PQ8IX06 675 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 SLC22A18ASQ8N1D0 253 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 LPCAT1Q8NF37 534 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 SLC35B2Q8TB61 432 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 COQ10AQ96MF6 247 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 RBM15Q96T37 977 aaKnown RBP eCLIP8.52□□□□□ -1.05
SP140-207ENST00000456542 TLR10Q9BXR5 811 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 FRMD8P1Q9BZ68 369 aaPredicted RBP8.52□□□□□ -1.05
SP140-207ENST00000456542 MBNL1Q9NR56 388 aaKnown RBP8.52□□□□□ -1.05
SP140-207ENST00000456542 FAM153AQ9UHL3 310 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 COQ6Q9Y2Z9 468 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 SCN8AQ9UQD0 1980 aa8.52□□□□□ -1.05
SP140-207ENST00000456542 DCDC2BA2VCK2 349 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 KCNK3O14649 394 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 KCNN4O15554 427 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 NDST3O95803 873 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 MT-CYBP00156 380 aaPredicted RBP8.51□□□□□ -1.05
SP140-207ENST00000456542 EPOP01588 193 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 ALPIP09923 528 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 CEACAM1P13688 526 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 CTPS1P17812 591 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 TEAD1P28347 426 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 THOP1P52888 689 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 SEMG2Q02383 582 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 CCDC173Q0VFZ6 552 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 MPP3Q13368 585 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 PDE1CQ14123 709 aaPredicted RBP8.51□□□□□ -1.05
SP140-207ENST00000456542 PTK2BQ14289 1009 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 ACOX1Q15067 660 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 SHBQ15464 509 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 QPCTQ16769 361 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 INAVAQ3KP66 663 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 ANKRD20A2Q5SQ80 823 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 ANKRD20A1Q5TYW2 823 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 ANKRD20A3Q5VUR7 823 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 LRRC66Q68CR7 880 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 ESRP1Q6NXG1 681 aaKnown RBP8.51□□□□□ -1.05
SP140-207ENST00000456542 CRTC1Q6UUV9 634 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 KDELC1Q6UW63 502 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 ERMP1Q7Z2K6 904 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 DGLUCYQ7Z3D6 616 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 TSPAN33Q86UF1 283 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 NAXDQ8IW45 347 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 SPATA22Q8NHS9 363 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 SAP25Q8TEE9 199 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 NUS1Q96E22 293 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 DTD2Q96FN9 168 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 SPATA13Q96N96 652 aa8.51□□□□□ -1.05
SP140-207ENST00000456542 PPP1R2P1Q96PQ5 205 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms