RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 LSMEM2Q8N112 164 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 BBS5Q8N3I7 341 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 SDR16C5Q8N3Y7 309 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 PGBD5Q8N414 524 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 ARL10Q8N8L6 244 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 KYQ8NBH2 561 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 NSMCE1Q8WV22 266 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 FUBP1Q96AE4 644 aaKnown RBP12.44□□□□□ -0.42
SMCR2-201ENST00000456090 IQCDQ96DY2 449 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 ATXN7L3BQ96GX2 97 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 NAF1Q96HR8 494 aaKnown RBP12.44□□□□□ -0.42
SMCR2-201ENST00000456090 ZNF578Q96N58 590 aaPredicted RBP12.44□□□□□ -0.42
SMCR2-201ENST00000456090 BBC3Q96PG8 261 aaPredicted RBP12.44□□□□□ -0.42
SMCR2-201ENST00000456090 NUDCD1Q96RS6 583 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 LGMNQ99538 433 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 MGME1Q9BQP7 344 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 SYNDIG1Q9H7V2 258 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 NOD2Q9HC29 1040 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 IFNKQ9P0W0 207 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 B4GALT6Q9UBX8 382 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 GPR34Q9UPC5 381 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 SATB2Q9UPW6 733 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 LUC7L2Q9Y383 392 aaKnown RBP12.44□□□□□ -0.42
SMCR2-201ENST00000456090 PCDHGC4Q9Y5F7 938 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 RAI2Q9Y5P3 530 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 AHCTF1Q8WYP5 2266 aa12.44□□□□□ -0.42
SMCR2-201ENST00000456090 TMEM202A6NGA9 273 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 MYO1FO00160 1098 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 DXOO77932 396 aaKnown RBP12.43□□□□□ -0.42
SMCR2-201ENST00000456090 CD48P09326 243 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 CR2P20023 1033 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 MMP13P45452 471 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 KIAA1024LP59773 190 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 MAXP61244 160 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 TLE3Q04726 772 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 MMRN1Q13201 1228 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 SPIDRQ14159 915 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 CCDC122Q5T0U0 273 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 MARC1Q5VT66 337 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 DENND2CQ68D51 928 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 PNCKQ6P2M8 343 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 SPACA3Q8IXA5 215 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 PELI3Q8N2H9 469 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 ZNF248Q8NDW4 579 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 OR56A4Q8NGH8 313 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 WDR48Q8TAF3 677 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 ZNF564Q8TBZ8 553 aaPredicted RBP12.43□□□□□ -0.42
SMCR2-201ENST00000456090 OR1E3Q8WZA6 343 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 SPOCK2Q92563 424 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 RBM15Q96T37 977 aaKnown RBP eCLIP12.43□□□□□ -0.42
SMCR2-201ENST00000456090 LGR4Q9BXB1 951 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 PRORYQ9H606 182 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 WDR26Q9H7D7 661 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 MRPL40Q9NQ50 206 aaKnown RBP12.43□□□□□ -0.42
SMCR2-201ENST00000456090 ENTPD2Q9Y5L3 495 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 DGKBQ9Y6T7 804 aa12.43□□□□□ -0.42
SMCR2-201ENST00000456090 BSNQ9UPA5 3926 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 A0A1W2PNU3 283 aaPredicted RBP12.42□□□□□ -0.42
SMCR2-201ENST00000456090 A0A1W2PQ67 120 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 CPP00450 1065 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 KELP23276 732 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 IL4RP24394 825 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 NFKBIAP25963 317 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 CASP14P31944 242 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 GJC1P36383 396 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 TRIM23P36406 574 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 ERVPABLB-1P60509 514 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 TRAF2Q12933 501 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 CNGA3Q16281 694 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 HADHQ16836 314 aaKnown RBP12.42□□□□□ -0.42
SMCR2-201ENST00000456090 TAF8Q7Z7C8 310 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 CCDC74AQ96AQ1 378 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 GRAMD1AQ96CP6 724 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 NUS1Q96E22 293 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 HIC2Q96JB3 615 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 COQ10AQ96MF6 247 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 FCRL3Q96P31 734 aaPredicted RBP12.42□□□□□ -0.42
SMCR2-201ENST00000456090 TMEM168Q9H0V1 697 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 FGF22Q9HCT0 170 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 NT5MQ9NPB1 228 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 ASCL3Q9NQ33 180 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 THSD1Q9NS62 852 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 RCOR3Q9P2K3 495 aaPredicted RBP12.42□□□□□ -0.42
SMCR2-201ENST00000456090 RABGEF1Q9UJ41 708 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 PHTF1Q9UMS5 762 aa12.42□□□□□ -0.42
SMCR2-201ENST00000456090 CFAP46Q8IYW2 2715 aa12.41□□□□□ -0.42
SMCR2-201ENST00000456090 NTN3O00634 580 aaPredicted RBP12.41□□□□□ -0.42
SMCR2-201ENST00000456090 TNFRSF10CO14798 259 aa12.41□□□□□ -0.42
SMCR2-201ENST00000456090 MFSD11O43934 449 aa12.41□□□□□ -0.42
SMCR2-201ENST00000456090 HEXIM1O94992 359 aaKnown RBP12.41□□□□□ -0.42
SMCR2-201ENST00000456090 HOXC4P09017 264 aaPredicted RBP12.41□□□□□ -0.42
SMCR2-201ENST00000456090 LHCGRP22888 699 aa12.41□□□□□ -0.42
SMCR2-201ENST00000456090 RBMS1P29558 406 aaKnown RBP12.41□□□□□ -0.42
SMCR2-201ENST00000456090 VIPR1P32241 457 aa12.41□□□□□ -0.42
SMCR2-201ENST00000456090 ETV3P41162 512 aa12.41□□□□□ -0.42
SMCR2-201ENST00000456090 PDX1P52945 283 aa12.41□□□□□ -0.42
SMCR2-201ENST00000456090 ITKQ08881 620 aa12.41□□□□□ -0.42
SMCR2-201ENST00000456090 DPYSL3Q14195 570 aa12.41□□□□□ -0.42
SMCR2-201ENST00000456090 ATP13A4Q4VNC1 1196 aa12.41□□□□□ -0.42
SMCR2-201ENST00000456090 RALGPS1Q5JS13 557 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms