RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 TAS2R38P59533 333 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 DHX9Q08211 1270 aaKnown RBP11.28□□□□□ -0.6
TRAF4-206ENST00000454852 BRD3Q15059 726 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 AGERQ15109 404 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 CCDC38Q502W7 563 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 SPDYCQ5MJ68 293 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 CERCAMQ5T4B2 595 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 STEAP4Q687X5 459 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 FBXL19Q6PCT2 694 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 CRTC1Q6UUV9 634 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 CYS1Q717R9 158 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 KDELC2Q7Z4H8 507 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 TMC3Q7Z5M5 1100 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 HDDC3Q8N4P3 179 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 MDGA1Q8NFP4 955 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 HNRNPLLQ8WVV9 542 aaKnown RBP11.28□□□□□ -0.6
TRAF4-206ENST00000454852 CAVIN3Q969G5 261 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 PWWP2AQ96N64 755 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 FUT8Q9BYC5 575 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 TREX1Q9NSU2 369 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 POLR3BQ9NW08 1133 aaPredicted RBP11.28□□□□□ -0.6
TRAF4-206ENST00000454852 SYBUQ9NX95 663 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 FBXL12Q9NXK8 326 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRAF4-206ENST00000454852 B4GALT6Q9UBX8 382 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 ZNF711Q9Y462 761 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 TCAF1Q9Y4C2 921 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 PLXND1Q9Y4D7 1925 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 MUC3AQ02505 3323 aa11.27□□□□□ -0.6
TRAF4-206ENST00000454852 SCN8AQ9UQD0 1980 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 A0A1W2PP55 124 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 C2orf81A6NN90 581 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 H7C0S8 307 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 USP1O94782 785 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 GSTA2P09210 222 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 ALPIP09923 528 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 ACADMP11310 421 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 TPH1P17752 444 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 PGAM1P18669 254 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 XPAP23025 273 aaPredicted RBP11.27□□□□□ -0.61
TRAF4-206ENST00000454852 OXTRP30559 389 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 MAGEA4P43358 317 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 TPMTP51580 245 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 ZNF140P52738 457 aaPredicted RBP11.27□□□□□ -0.61
TRAF4-206ENST00000454852 STC1P52823 247 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 PTSQ03393 145 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 PDIA2Q13087 525 aaKnown RBP11.27□□□□□ -0.61
TRAF4-206ENST00000454852 MAP7D1Q3KQU3 841 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 BBS9Q3SYG4 887 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 ZDHHC20Q5W0Z9 365 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 ZNF449Q6P9G9 518 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 CYP2U1Q7Z449 544 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 NLRP8Q86W28 1048 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 MPP5Q8N3R9 675 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 FBXL6Q8N531 539 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 MREGQ8N565 214 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 PPHLN1Q8NEY8 458 aaKnown RBP11.27□□□□□ -0.61
TRAF4-206ENST00000454852 STYXQ8WUJ0 223 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 ASB12Q8WXK4 309 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 EID2BQ96D98 161 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 STAMBPL1Q96FJ0 436 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 SGSM3Q96HU1 749 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 OMDQ99983 421 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 CDH19Q9H159 772 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 ZFYVE1Q9HBF4 777 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 SGK2Q9HBY8 427 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 PREBQ9HCU5 417 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 KCTD5Q9NXV2 234 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 IL17CQ9P0M4 197 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 SERGEFQ9UGK8 458 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 NCKAP1Q9Y2A7 1128 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 ZNF106Q9H2Y7 1883 aaKnown RBP11.27□□□□□ -0.61
TRAF4-206ENST00000454852 MYLKQ15746 1914 aa11.27□□□□□ -0.61
TRAF4-206ENST00000454852 TNFRSF10AO00220 468 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 AURKAO14965 403 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 SPAG6O75602 509 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 RNASEH2AO75792 299 aaKnown RBP11.26□□□□□ -0.61
TRAF4-206ENST00000454852 PRKCGP05129 697 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 FAM153BP0C7A2 387 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 CTPS1P17812 591 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 LPOP22079 712 aaPredicted RBP11.26□□□□□ -0.61
TRAF4-206ENST00000454852 ELK3P41970 407 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 NUBP1P53384 320 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 ADPRHP54922 357 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 DCDC1P59894 354 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 POU6F1Q14863 301 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 FASTKD3Q14CZ7 662 aaKnown RBP11.26□□□□□ -0.61
TRAF4-206ENST00000454852 CNGA3Q16281 694 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 SKIDA1Q1XH10 827 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 POM121L1PQ3SYA9 428 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 FAM153CQ494X1 144 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 MAP9Q49MG5 647 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 SPANXN3Q5MJ09 141 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 TSTD2Q5T7W7 516 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 LRRC66Q68CR7 880 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 ANO7Q6IWH7 933 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 KIAA1161Q6NSJ0 714 aa11.26□□□□□ -0.61
TRAF4-206ENST00000454852 KIAA1324Q6UXG2 1013 aaKnown RBP11.26□□□□□ -0.61
TRAF4-206ENST00000454852 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.26□□□□□ -0.61
TRAF4-206ENST00000454852 LIPIQ6XZB0 460 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms