RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 DDX28Q9NUL7 540 aaKnown RBP11.21□□□□□ -0.61
DDR1-240ENST00000454612 VPS28Q9UK41 221 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 VWA7Q9Y334 891 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 KANSL1LA0AUZ9 987 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 PDLIM1O00151 329 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 PIRO00625 290 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 PPP6CO00743 305 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 NCAM2O15394 837 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 TGDSO95455 350 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 SLC2A3P11169 496 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 EFNA1P20827 205 aaPredicted RBP11.21□□□□□ -0.61
DDR1-240ENST00000454612 HARS2P49590 506 aaKnown RBP11.21□□□□□ -0.61
DDR1-240ENST00000454612 PGFP49763 221 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 PRSS55Q6UWB4 352 aaPredicted RBP11.21□□□□□ -0.61
DDR1-240ENST00000454612 RBM44Q6ZP01 1051 aaKnown RBP11.21□□□□□ -0.61
DDR1-240ENST00000454612 CYP4V2Q6ZWL3 525 aaPredicted RBP11.21□□□□□ -0.61
DDR1-240ENST00000454612 DCP1BQ8IZD4 617 aaKnown RBP11.21□□□□□ -0.61
DDR1-240ENST00000454612 PTPN18Q99952 460 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 GBA3Q9H227 469 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 NMUR1Q9HB89 426 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 AP4B1Q9Y6B7 739 aa11.21□□□□□ -0.61
DDR1-240ENST00000454612 ASCC3Q8N3C0 2202 aaKnown RBP11.21□□□□□ -0.62
DDR1-240ENST00000454612 NUP214P35658 2090 aaPredicted RBP11.21□□□□□ -0.62
DDR1-240ENST00000454612 DNAJC25-GNG10A0A024R161 153 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 HAPLN1P10915 354 aaPredicted RBP11.21□□□□□ -0.62
DDR1-240ENST00000454612 PRKAR2AP13861 404 aaKnown RBP11.21□□□□□ -0.62
DDR1-240ENST00000454612 TUFMP49411 452 aaKnown RBP11.21□□□□□ -0.62
DDR1-240ENST00000454612 ACTR3P61158 418 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 STX5Q13190 355 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 PLCL1Q15111 1095 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 NEDD8Q15843 81 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 TRIM16LQ309B1 348 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 MRNIPQ6NTE8 343 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 SZRD1Q7Z422 152 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 HEATR4Q86WZ0 1026 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 SPPL2CQ8IUH8 684 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 TOP6BLQ8N6T0 577 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 FNDC5Q8NAU1 212 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 OR4K2Q8NGD2 314 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 LRTOMTQ8WZ04 291 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 RNF145Q96MT1 663 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 ABCC13Q9NSE7 274 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 SELENONQ9NZV5 590 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 ZNF229Q9UJW7 825 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 ADAMTS6Q9UKP5 1117 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 PPME1Q9Y570 386 aa11.21□□□□□ -0.62
DDR1-240ENST00000454612 ENPP3O14638 875 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 GPR39O43194 453 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 SERPINF2P08697 491 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 IL10P22301 178 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 CD68P34810 354 aaPredicted RBP11.2□□□□□ -0.62
DDR1-240ENST00000454612 CDH15P55291 814 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 NAA20P61599 178 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 NR6A1Q15406 480 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 DET1Q7L5Y6 550 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 OR10T2Q8NGX3 314 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 GIPC3Q8TF64 312 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 LPGAT1Q92604 370 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 SCHIP1Q9P0W5 487 aaPredicted RBP11.2□□□□□ -0.62
DDR1-240ENST00000454612 DNAJB4Q9UDY4 337 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 CROTQ9UKG9 612 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 EMCNQ9ULC0 261 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 WDR81Q562E7 1941 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 TRPC5OSA6NMA1 111 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 MYO1GB0I1T2 1018 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 CCNT2O60583 730 aaKnown RBP11.2□□□□□ -0.62
DDR1-240ENST00000454612 TLR5O60602 858 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 AOC2O75106 756 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 OCM2P0CE71 109 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 OCMP0CE72 109 aaPredicted RBP11.2□□□□□ -0.62
DDR1-240ENST00000454612 MTA1Q13330 715 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 KRT72Q14CN4 511 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 CYP51A1Q16850 503 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 FAM110CQ1W6H9 321 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 TIGD2Q4W5G0 525 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 TTC33Q6PID6 262 aaPredicted RBP11.2□□□□□ -0.62
DDR1-240ENST00000454612 B3GNT6Q6ZMB0 384 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 AGMOQ6ZNB7 445 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 GLT6D1Q7Z4J2 308 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 FBXO39Q8N4B4 442 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 ATP6V0D2Q8N8Y2 350 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 ZNF784Q8NCA9 323 aaPredicted RBP11.2□□□□□ -0.62
DDR1-240ENST00000454612 CAPNS2Q96L46 248 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 ARMC7Q9H6L4 198 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 CYLDQ9NQC7 956 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 MOCS1Q9NZB8 636 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 NDUFA13Q9P0J0 144 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 SPATA7Q9P0W8 599 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 SATB2Q9UPW6 733 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 TRAF6Q9Y4K3 522 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 PCDHB9Q9Y5E1 797 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 TRIP11Q15643 1979 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.2□□□□□ -0.62
DDR1-240ENST00000454612 MAGEB16A2A368 324 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 HEATR9A2RTY3 570 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 CKMP06732 381 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 SLC10A3P09131 477 aa11.2□□□□□ -0.62
DDR1-240ENST00000454612 RPL10P27635 214 aaKnown RBP11.2□□□□□ -0.62
DDR1-240ENST00000454612 PPARGP37231 505 aaPredicted RBP11.2□□□□□ -0.62
DDR1-240ENST00000454612 MRPS15P82914 257 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms