RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 KCNA7Q96RP8 456 aa13.9□□□□□ -0.18
UBE2D3-210ENST00000453744 EIF2AQ9BY44 585 aaKnown RBP13.9□□□□□ -0.18
UBE2D3-210ENST00000453744 AKTIPQ9H8T0 292 aa13.9□□□□□ -0.18
UBE2D3-210ENST00000453744 ZNF232Q9UNY5 417 aa13.9□□□□□ -0.18
UBE2D3-210ENST00000453744 TAF1LQ8IZX4 1826 aa13.9□□□□□ -0.18
UBE2D3-210ENST00000453744 OR51F1A6NGY5 319 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 CCDC154A6NI56 674 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 YJEFN3A6XGL0 299 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 PIP5K1BO14986 540 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 ARPC2O15144 300 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 PLSCR1O15162 318 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 LRIG2O94898 1065 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 ZNF12P17014 697 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 LBPP18428 481 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 CAPGP40121 348 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 LIPEQ05469 1076 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 BORAQ6PGQ7 559 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 SLC22A9Q8IVM8 553 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 CALML6Q8TD86 181 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 GIPC2Q8TF65 315 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 GLT1D1Q96MS3 346 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 PPP1R10Q96QC0 940 aaKnown RBP13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 ELP3Q9H9T3 547 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 SP110Q9HB58 689 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 ABCB10Q9NRK6 738 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 LIMD1Q9UGP4 676 aa13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 PNMA8BQ9ULN7 279 aaPredicted RBP13.9□□□□□ -0.19
UBE2D3-210ENST00000453744 LINC00854A0A1B0GVQ3 168 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 CD247P20963 164 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 PPIL2Q13356 520 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 DNASE1L3Q13609 305 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 KYAT1Q16773 422 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 ATP6AP1LQ52LC2 224 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 CARM1Q86X55 608 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 LSMEM2Q8N112 164 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 FNDC5Q8NAU1 212 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 CAPSLQ8WWF8 208 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 HTRA1Q92743 480 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 KHSRPQ92945 711 aaKnown RBP eCLIP13.89□□□□□ -0.193e-7■■■□□ 18.3
UBE2D3-210ENST00000453744 PPP1R14BQ96C90 147 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 MRGBPQ9NV56 204 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 LRRC14BA6NHZ5 514 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 NOBOXO60393 691 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 NPR3P17342 541 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 CYP2B6P20813 491 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 PPP4R4Q6NUP7 873 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 SLCO6A1Q86UG4 719 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 TERB1Q8NA31 727 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 CDC26Q8NHZ8 85 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 ITFG1Q8TB96 612 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 OSCP1Q8WVF1 389 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 FAM162AQ96A26 154 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 BIRC8Q96P09 236 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 RPF2Q9H7B2 306 aaKnown RBP13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 RNF112Q9ULX5 631 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 A0A087X1B8 175 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 TTC24A2A3L6 582 aaPredicted RBP13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 LSM1O15116 133 aaKnown RBP13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 PSMD3O43242 534 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 RHOBTB1O94844 696 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 OXTRP30559 389 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 ICAM3P32942 547 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 INCA1Q0VD86 236 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 ZNF772Q68DY9 489 aaPredicted RBP13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 ARHGAP36Q6ZRI8 547 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 PIM3Q86V86 326 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 ZDHHC13Q8IUH4 622 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 CMTR2Q8IYT2 770 aaKnown RBP13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 C8orf59Q8N0T1 100 aaPredicted RBP13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 CLYBLQ8N0X4 340 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 PSMA8Q8TAA3 256 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 ELMO1Q92556 727 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 ZMAT2Q96NC0 199 aaKnown RBP13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 MUS81Q96NY9 551 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 ALG2Q9H553 416 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 HMG20AQ9NP66 347 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 CASS4Q9NQ75 786 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 TBCCD1Q9NVR7 557 aa13.89□□□□□ -0.19
UBE2D3-210ENST00000453744 H3BRB1 525 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 AZIN1O14977 448 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 BMP10O95393 424 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 NADKO95544 446 aaPredicted RBP13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 HMBSP08397 361 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 CD97P48960 835 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 CLK1P49759 484 aaKnown RBP13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 HK2P52789 917 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 TRAP1Q12931 704 aaKnown RBP13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 GPR162Q16538 588 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 HMBOX1Q6NT76 420 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 BNIPLQ7Z465 357 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 TEKT5Q96M29 485 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 CHID1Q9BWS9 393 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 ANKRD60Q9BZ19 345 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 SACM1LQ9NTJ5 587 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 TMA7Q9Y2S6 64 aaKnown RBP13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 ANGPTL3Q9Y5C1 460 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 NPHS1O60500 1241 aa13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 SYNCRIPO60506 623 aaKnown RBP13.88□□□□□ -0.19
UBE2D3-210ENST00000453744 CNOT3O75175 753 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms