RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 RNF215Q9Y6U7 377 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 COL12A1Q99715 3063 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 TMX2-CTNND1H3BSU7 103 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 TEX33O43247 280 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 EFSO43281 561 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 DAPK3O43293 454 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 NOBOXO60393 691 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 LIPCP11150 499 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 GLB1P16278 677 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 GM2AP17900 193 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 KELP23276 732 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 HTR7P34969 479 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 ETV5P41161 510 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 MAPK10P53779 464 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 MAZP56270 477 aaKnown RBP11.72□□□□□ -0.53
GARNL3-210ENST00000453030 NFATC3Q12968 1075 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 C14orf28Q4W4Y0 310 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 PPP6R3Q5H9R7 873 aaPredicted RBP11.72□□□□□ -0.53
GARNL3-210ENST00000453030 SPECC1LQ69YQ0 1117 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 LIPIQ6XZB0 460 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 RFX8Q6ZV50 586 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 DPPA4Q7L190 304 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 TMPRSS9Q7Z410 1059 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 ARHGAP12Q8IWW6 846 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 ECHDC3Q96DC8 303 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 LGR4Q9BXB1 951 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 DONSONQ9NYP3 566 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 FOXJ2Q9P0K8 574 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 APPL1Q9UKG1 709 aa11.72□□□□□ -0.53
GARNL3-210ENST00000453030 PRAMEF33A0A0G2JMD5 474 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 PRSS38A1L453 326 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 TTC24A2A3L6 582 aaPredicted RBP11.71□□□□□ -0.53
GARNL3-210ENST00000453030 PRAMEF10O60809 474 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 ERCC2P18074 760 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 SCNN1BP51168 640 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 MYL5Q02045 173 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 ARHGEF7Q14155 803 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 HLTFQ14527 1009 aaKnown RBP eCLIP11.71□□□□□ -0.53
GARNL3-210ENST00000453030 ACOX1Q15067 660 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 MANEAQ5SRI9 462 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 DENND2CQ68D51 928 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 ACAD10Q6JQN1 1059 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 USP53Q70EK8 1073 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 TP53INP2Q8IXH6 220 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 PDCD6IPQ8WUM4 868 aaKnown RBP11.71□□□□□ -0.53
GARNL3-210ENST00000453030 EXTL1Q92935 676 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 NUS1Q96E22 293 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 SGF29Q96ES7 293 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 TRIM7Q9C029 511 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 TRIM4Q9C037 500 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 CLMPQ9H6B4 373 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 RDH14Q9HBH5 336 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 LRIT1Q9P2V4 623 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 B4GALT6Q9UBX8 382 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 LIMA1Q9UHB6 759 aaKnown RBP11.71□□□□□ -0.53
GARNL3-210ENST00000453030 ACSL6Q9UKU0 697 aa11.71□□□□□ -0.53
GARNL3-210ENST00000453030 GOLGA6CA6NDK9 693 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 GOLGA6BA6NDN3 693 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 NVLO15381 856 aaKnown RBP11.7□□□□□ -0.54
GARNL3-210ENST00000453030 GOLGA6DP0CG33 693 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 ATXN8OSP0DMR3 200 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 FERP16591 822 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 CSNK1DP48730 415 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 ZFP36L1Q07352 338 aaKnown RBP11.7□□□□□ -0.54
GARNL3-210ENST00000453030 MAMLD1Q13495 774 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 ZNF235Q14590 738 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 CNGA3Q16281 694 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 AMZ1Q400G9 498 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 ERMARDQ5T6L9 678 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 AFMIDQ63HM1 303 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 HEATR4Q86WZ0 1026 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 ZFAND4Q86XD8 727 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 SLITRK4Q8IW52 837 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 ARFGAP1Q8N6T3 406 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 EXD3Q8N9H8 876 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 KIAA1524Q8TCG1 905 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 USP7Q93009 1102 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 NSMCE3Q96MG7 304 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 ERGIC2Q96RQ1 377 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 CMKLR1Q99788 373 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 ARHGAP9Q9BRR9 750 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 FAM117AQ9C073 453 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 SEMA6CQ9H3T2 930 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 CARS2Q9HA77 564 aaKnown RBP11.7□□□□□ -0.54
GARNL3-210ENST00000453030 LMBRD1Q9NUN5 540 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 PARVAQ9NVD7 372 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 GOLGA6AQ9NYA3 693 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 PCDHGA4Q9Y5G9 962 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 HEMK1Q9Y5R4 338 aaPredicted RBP11.7□□□□□ -0.54
GARNL3-210ENST00000453030 UBR5O95071 2799 aaPredicted RBP11.7□□□□□ -0.54
GARNL3-210ENST00000453030 DOPEY2Q9Y3R5 2298 aa11.7□□□□□ -0.54
GARNL3-210ENST00000453030 CFAP69A5D8W1 941 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 EIF3CLB5ME19 914 aaKnown RBP11.69□□□□□ -0.54
GARNL3-210ENST00000453030 C9orf172C9J069 976 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 TRAFD1O14545 582 aaPredicted RBP11.69□□□□□ -0.54
GARNL3-210ENST00000453030 TNFRSF10CO14798 259 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 NUDT21O43809 227 aaKnown RBP11.69□□□□□ -0.54
GARNL3-210ENST00000453030 PRPSAP2O60256 369 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 RNF8O76064 485 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 CPP00450 1065 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms