RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 SLC1A2P43004 574 aa10.77□□□□□ -0.68
PKP4-206ENST00000452162 YBEYP58557 167 aaPredicted RBP10.77□□□□□ -0.68
PKP4-206ENST00000452162 ABCE1P61221 599 aaKnown RBP10.77□□□□□ -0.68
PKP4-206ENST00000452162 ZXDBP98169 803 aa10.77□□□□□ -0.68
PKP4-206ENST00000452162 CTBP1Q13363 440 aa10.77□□□□□ -0.68
PKP4-206ENST00000452162 TUBB3Q13509 450 aa10.77□□□□□ -0.68
PKP4-206ENST00000452162 ITGA9Q13797 1035 aa10.77□□□□□ -0.68
PKP4-206ENST00000452162 SEPT6Q14141 434 aa10.77□□□□□ -0.68
PKP4-206ENST00000452162 GRM2Q14416 872 aa10.77□□□□□ -0.68
PKP4-206ENST00000452162 SNX30Q5VWJ9 437 aa10.77□□□□□ -0.68
PKP4-206ENST00000452162 KDELC2Q7Z4H8 507 aa10.77□□□□□ -0.68
PKP4-206ENST00000452162 LCA5Q86VQ0 697 aa10.77□□□□□ -0.68
PKP4-206ENST00000452162 SLC41A1Q8IVJ1 513 aa10.77□□□□□ -0.68
PKP4-206ENST00000452162 SLC25A41Q8N5S1 370 aa10.77□□□□□ -0.68
PKP4-206ENST00000452162 RIN3Q8TB24 985 aa10.77□□□□□ -0.68
PKP4-206ENST00000452162 NXPE3Q969Y0 559 aa10.77□□□□□ -0.68
PKP4-206ENST00000452162 CDK5RAP1Q96SZ6 601 aaKnown RBP10.77□□□□□ -0.68
PKP4-206ENST00000452162 EBF4Q9BQW3 602 aa10.77□□□□□ -0.68
PKP4-206ENST00000452162 STN1Q9H668 368 aaKnown RBP10.77□□□□□ -0.68
PKP4-206ENST00000452162 NMRAL1Q9HBL8 299 aa10.77□□□□□ -0.68
PKP4-206ENST00000452162 TICRRQ7Z2Z1 1910 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 HEATR9A2RTY3 570 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 PHGDHO43175 533 aaKnown RBP10.77□□□□□ -0.69
PKP4-206ENST00000452162 COCHO43405 550 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 PRAMEF11O60813 436 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 CALB2P22676 271 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 WEE1P30291 646 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 SLC6A4P31645 630 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 SERPINH1P50454 418 aaKnown RBP10.77□□□□□ -0.69
PKP4-206ENST00000452162 MNAT1P51948 309 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 ITKQ08881 620 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 USP10Q14694 798 aaKnown RBP10.77□□□□□ -0.69
PKP4-206ENST00000452162 HECTD3Q5T447 861 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 MAVSQ7Z434 540 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 TREML1Q86YW5 311 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 WDR75Q8IWA0 830 aaKnown RBP10.77□□□□□ -0.69
PKP4-206ENST00000452162 TMEM151AQ8N4L1 468 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 NSMCE1Q8WV22 266 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 FAM167BQ9BTA0 163 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 PDFQ9HBH1 243 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 TDP1Q9NUW8 608 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 ARMCX1Q9P291 453 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 ZMYM5Q9UJ78 669 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 DNMT3LQ9UJW3 386 aa10.77□□□□□ -0.69
PKP4-206ENST00000452162 CHD5Q8TDI0 1954 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 SOBPA7XYQ1 873 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.76□□□□□ -0.69
PKP4-206ENST00000452162 F5H5T6 163 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 ZNF195O14628 629 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 DCXO43602 365 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 ACSL4O60488 711 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 CCDC22O60826 627 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 OLFM2O95897 454 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 APOA4P06727 396 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 SBK3P0C264 359 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 COL6A2P12110 1019 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 OR1E1P30953 314 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 SLC8A1P32418 973 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 PGGT1BP53609 377 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 THOC5Q13769 683 aaKnown RBP10.76□□□□□ -0.69
PKP4-206ENST00000452162 LBRQ14739 615 aaKnown RBP10.76□□□□□ -0.69
PKP4-206ENST00000452162 TSTD2Q5T7W7 516 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 ZNF470Q6ECI4 717 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 NAPRTQ6XQN6 538 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 ZNF354CQ86Y25 554 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 CENPLQ8N0S6 344 aaPredicted RBP10.76□□□□□ -0.69
PKP4-206ENST00000452162 LGI2Q8N0V4 545 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 FAM13CQ8NE31 585 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 TTC16Q8NEE8 873 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 RDH11Q8TC12 318 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 PPP4R1Q8TF05 950 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 AGAP11Q8TF27 550 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 BTBD10Q9BSF8 475 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 PNPOQ9NVS9 261 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 SMPD4Q9NXE4 827 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 MID2Q9UJV3 735 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 TLK1Q9UKI8 766 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 LOC285095A0A1B0GVY8 99 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 FAM95CA0A1B0GW59 222 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 TTC24A2A3L6 582 aaPredicted RBP10.76□□□□□ -0.69
PKP4-206ENST00000452162 MROH6A6NGR9 719 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 TMEM114B3SHH9 223 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 DLL1O00548 723 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 PAPSS2O95340 614 aaPredicted RBP10.76□□□□□ -0.69
PKP4-206ENST00000452162 SERPINA6P08185 405 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 ATXN1LP0C7T5 689 aaKnown RBP10.76□□□□□ -0.69
PKP4-206ENST00000452162 PSMC3P17980 439 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 ATP5C1P36542 298 aaKnown RBP10.76□□□□□ -0.69
PKP4-206ENST00000452162 CD151P48509 253 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 ZXDAP98168 799 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 SLC12A1Q13621 1099 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 SIRPB2Q5JXA9 342 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 RABGAP1LQ5R372 815 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 TMCO4Q5TGY1 634 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 NEPROQ6NW34 567 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 ZYG11AQ6WRX3 759 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 RINLQ6ZS11 566 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 KIAA0408Q6ZU52 694 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 RAPH1Q70E73 1250 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 CEP97Q8IW35 865 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms