RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 FFAR2O15552 330 aa17.16■□□□□ 0.34
PRPF40A-204ENST00000450303 XPAP23025 273 aaPredicted RBP17.16■□□□□ 0.34
PRPF40A-204ENST00000450303 DGKAP23743 735 aa17.16■□□□□ 0.34
PRPF40A-204ENST00000450303 SEMG2Q02383 582 aa17.16■□□□□ 0.34
PRPF40A-204ENST00000450303 PDK1Q15118 436 aa17.16■□□□□ 0.34
PRPF40A-204ENST00000450303 AFMIDQ63HM1 303 aa17.16■□□□□ 0.34
PRPF40A-204ENST00000450303 TSEN2Q8NCE0 465 aaKnown RBP17.16■□□□□ 0.34
PRPF40A-204ENST00000450303 CXorf40AQ8TE69 158 aa17.16■□□□□ 0.34
PRPF40A-204ENST00000450303 HAUS1Q96CS2 278 aa17.16■□□□□ 0.34
PRPF40A-204ENST00000450303 CPEB1Q9BZB8 566 aaKnown RBP17.16■□□□□ 0.34
PRPF40A-204ENST00000450303 BRD8Q9H0E9 1235 aa17.16■□□□□ 0.34
PRPF40A-204ENST00000450303 SP110Q9HB58 689 aa17.16■□□□□ 0.34
PRPF40A-204ENST00000450303 DNAJC28Q9NX36 388 aa17.16■□□□□ 0.34
PRPF40A-204ENST00000450303 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.16■□□□□ 0.34
PRPF40A-204ENST00000450303 IPO11Q9UI26 975 aaKnown RBP17.16■□□□□ 0.34
PRPF40A-204ENST00000450303 V9GYY5 206 aaPredicted RBP17.16■□□□□ 0.34
PRPF40A-204ENST00000450303 SPEGQ15772 3267 aa17.16■□□□□ 0.34
PRPF40A-204ENST00000450303 TMEM8BA6NDV4 472 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 HACD1B0YJ81 288 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 SIGLEC6O43699 453 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 MFSD11O43934 449 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 PRKCGP05129 697 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 OTUD4Q01804 1114 aaKnown RBP17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 ADCY2Q08462 1091 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 XRCC4Q13426 336 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 FZD2Q14332 565 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 NOMO1Q15155 1222 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 ERCC6LQ2NKX8 1250 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 TPRG1LQ5T0D9 272 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 TEX35Q5T0J7 233 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 KYAT3Q6YP21 454 aaKnown RBP17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 SRLQ86TD4 932 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 CAMK1DQ8IU85 385 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 ACTL9Q8TC94 416 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 LENG8Q96PV6 779 aaPredicted RBP17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 SUV39H2Q9H5I1 410 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 DKK3Q9UBP4 350 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 COQ6Q9Y2Z9 468 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 SHROOM3Q8TF72 1996 aa17.15■□□□□ 0.34
PRPF40A-204ENST00000450303 TTC24A2A3L6 582 aaPredicted RBP17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 CTAGE15A4D2H0 777 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 H7C0C1 242 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 CCDC188H7C350 402 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 RFPL3O75679 317 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 PIAS2O75928 621 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 TM7SF2O76062 418 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 TUBBP07437 444 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 CTAGE8P0CG41 777 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 ATP5OP48047 213 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 ACADVLP49748 655 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 EIF3EP60228 445 aaKnown RBP17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 GBE1Q04446 702 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 IL10RBQ08334 325 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 PDE1CQ14123 709 aaPredicted RBP17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 CCNG2Q16589 344 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 TIGD7Q6NT04 549 aaPredicted RBP17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 NPNTQ6UXI9 565 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 CTAGE6Q86UF2 777 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 ZSWIM9Q86XI8 627 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 DCP2Q8IU60 420 aaKnown RBP17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 CTAGE4Q8IX94 777 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 GALNT15Q8N3T1 639 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 ATPAF2Q8N5M1 289 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 CCNYQ8ND76 341 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 FAM174AQ8TBP5 190 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 HERPUD2Q9BSE4 406 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 CINPQ9BW66 212 aaPredicted RBP17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 MBNL1Q9NR56 388 aaKnown RBP17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 DTLQ9NZJ0 730 aa17.14■□□□□ 0.33
PRPF40A-204ENST00000450303 SPTY2D1-AS1A0A0U1RR47 76 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 TCRBV7S2A1N4TA0A589 114 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 SRRM3A6NNA2 597 aaPredicted RBP17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 TAF4O00268 1085 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 MUSKO15146 869 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 NEBLO76041 1014 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 MYF5P13349 255 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 PECAM1P16284 738 aaPredicted RBP17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 CKMT2P17540 419 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 IGFALSP35858 605 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 RABIFP47224 123 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 GALNT2Q10471 571 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 SMAD1Q15797 465 aaKnown RBP17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 UGP2Q16851 508 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 PROX2Q3B8N5 592 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 TMEM52BQ4KMG9 183 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 CFAP58Q5T655 872 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 CDKL3Q8IVW4 592 aaPredicted RBP17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 MDM1Q8TC05 714 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 NSMCE1Q8WV22 266 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 TFB1MQ8WVM0 346 aaKnown RBP17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 ASB12Q8WXK4 309 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 CENPTQ96BT3 561 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 HDAC11Q96DB2 347 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 NSMCE3Q96MG7 304 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 RUNDC3BQ96NL0 473 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 AP1M1Q9BXS5 423 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 PCDH12Q9NPG4 1184 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 GPR27Q9NS67 375 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 KLF15Q9UIH9 416 aa17.13■□□□□ 0.33
PRPF40A-204ENST00000450303 MYLKQ15746 1914 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms