RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 KREMEN1Q96MU8 473 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 TCF25Q9BQ70 676 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 SNX15Q9NRS6 342 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 PPIEQ9UNP9 301 aaKnown RBP10.22□□□□□ -0.77
SCN10A-201ENST00000449082 HBS1LQ9Y450 684 aaKnown RBP10.22□□□□□ -0.77
SCN10A-201ENST00000449082 SOWAHBA6NEL2 793 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 C5orf60A6NFR6 353 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 ENO4A6NNW6 628 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 HMGB3O15347 200 aaKnown RBP10.22□□□□□ -0.77
SCN10A-201ENST00000449082 PDE9AO76083 593 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 MTAPQ13126 283 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 PARGQ86W56 976 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 ULK2Q8IYT8 1036 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 SNX27Q96L92 541 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 ANKRD27Q96NW4 1050 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 CSPG4P5Q96PW8 444 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 ERVW-1Q9UQF0 538 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 BTRCQ9Y297 605 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 AZIN1O14977 448 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 ERAL1O75616 437 aaKnown RBP10.22□□□□□ -0.77
SCN10A-201ENST00000449082 HNRNPH3P31942 346 aaKnown RBP10.22□□□□□ -0.77
SCN10A-201ENST00000449082 ST13P50502 369 aaKnown RBP10.22□□□□□ -0.77
SCN10A-201ENST00000449082 PKNOX1P55347 436 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 PTSQ03393 145 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 NOMO1Q15155 1222 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 TAPT1Q6NXT6 567 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 GPR180Q86V85 440 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 CENPIQ92674 756 aaPredicted RBP10.22□□□□□ -0.77
SCN10A-201ENST00000449082 TNFRSF25Q93038 417 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 FEM1CQ96JP0 617 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 CPXM1Q96SM3 734 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 MRPS26Q9BYN8 205 aaKnown RBP10.22□□□□□ -0.77
SCN10A-201ENST00000449082 ACSS3Q9H6R3 686 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 GULP1Q9UBP9 304 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 RAI2Q9Y5P3 530 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 MDM4O15151 490 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 BANF1O75531 89 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 RNASEH2AO75792 299 aaKnown RBP10.22□□□□□ -0.77
SCN10A-201ENST00000449082 UGT2B4P06133 528 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 CDC42P60953 191 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 CPSF6Q16630 551 aaKnown RBP eCLIP10.22□□□□□ -0.77
SCN10A-201ENST00000449082 BHLHE22Q8NFJ8 381 aaPredicted RBP10.22□□□□□ -0.77
SCN10A-201ENST00000449082 ST6GALNAC4Q9H4F1 302 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 XPR1Q9UBH6 696 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 COG5Q9UP83 839 aa10.22□□□□□ -0.77
SCN10A-201ENST00000449082 STX11O75558 287 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 BMP6P22004 513 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 IDSP22304 550 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 SPAM1P38567 509 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 GABRB2P47870 512 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 CCR3P51677 355 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 PRKCZQ05513 592 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 AUHQ13825 339 aaKnown RBP10.21□□□□□ -0.77
SCN10A-201ENST00000449082 TRIM40Q6P9F5 258 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 GCNT7Q6ZNI0 430 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 TSEN2Q8NCE0 465 aaKnown RBP10.21□□□□□ -0.77
SCN10A-201ENST00000449082 ITCHQ96J02 903 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 HIC2Q96JB3 615 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 MARK4Q96L34 752 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 EVLQ9UI08 416 aaPredicted RBP10.21□□□□□ -0.77
SCN10A-201ENST00000449082 MRTO4Q9UKD2 239 aaKnown RBP10.21□□□□□ -0.77
SCN10A-201ENST00000449082 EFR3BQ9Y2G0 817 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 LYVE1Q9Y5Y7 322 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 MED1Q15648 1581 aaPredicted RBP10.21□□□□□ -0.77
SCN10A-201ENST00000449082 CBX6O95503 412 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 RAB14P61106 215 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 ADGRG2Q8IZP9 1017 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 PTCD2Q8WV60 388 aaKnown RBP10.21□□□□□ -0.77
SCN10A-201ENST00000449082 PLD4Q96BZ4 506 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 BTBD9Q96Q07 612 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 KCTD15Q96SI1 283 aaPredicted RBP10.21□□□□□ -0.77
SCN10A-201ENST00000449082 AIF1LQ9BQI0 150 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 PCDHGC3Q9UN70 934 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 SLC9A8Q9Y2E8 581 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 COLEC10Q9Y6Z7 277 aa10.21□□□□□ -0.77
SCN10A-201ENST00000449082 DUPD1Q68J44 220 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 NEK5Q6P3R8 708 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 C11orf88Q6PI97 169 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 PACS1Q6VY07 963 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 FAM220AQ7Z4H9 259 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 KRT77Q7Z794 578 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 CACTIN-AS1Q8N1I8 211 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 C1orf127Q8N9H9 656 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 ZNF248Q8NDW4 579 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 CLEC4DQ8WXI8 215 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 ZDHHC4Q9NPG8 344 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 MYRFQ9Y2G1 1151 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 H3BNH8 94 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 PRMT5O14744 637 aaPredicted RBP10.21□□□□□ -0.78
SCN10A-201ENST00000449082 PRMT3O60678 531 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 SERPINB7O75635 380 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 NDST3O95803 873 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 VIPP01282 170 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 SHBGP04278 402 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 TNK2Q07912 1038 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 PDZK1Q5T2W1 519 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 TRIQKQ629K1 86 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 PLEKHA7Q6IQ23 1121 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 OR14C36Q8NHC7 312 aa10.21□□□□□ -0.78
SCN10A-201ENST00000449082 POP5Q969H6 163 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms