RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 LRRC8EQ6NSJ5 796 aa17.75■□□□□ 0.43
LMNA-208ENST00000448611 OR4K2Q8NGD2 314 aa17.75■□□□□ 0.43
LMNA-208ENST00000448611 OR4L1Q8NH43 312 aa17.75■□□□□ 0.43
LMNA-208ENST00000448611 USP13Q92995 863 aaPredicted RBP17.75■□□□□ 0.43
LMNA-208ENST00000448611 CATSPERZQ9NTU4 200 aa17.75■□□□□ 0.43
LMNA-208ENST00000448611 OXSMQ9NWU1 459 aa17.75■□□□□ 0.43
LMNA-208ENST00000448611 ZFP69BQ9UJL9 534 aa17.75■□□□□ 0.43
LMNA-208ENST00000448611 INTS6Q9UL03 887 aaKnown RBP17.75■□□□□ 0.43
LMNA-208ENST00000448611 C2orf81A6NN90 581 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 SMAD6O43541 496 aaKnown RBP17.74■□□□□ 0.43
LMNA-208ENST00000448611 TRIM13O60858 407 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 WISP3O95389 354 aaPredicted RBP17.74■□□□□ 0.43
LMNA-208ENST00000448611 RB1P06400 928 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 KITP10721 976 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 OGNP20774 298 aaKnown RBP17.74■□□□□ 0.43
LMNA-208ENST00000448611 SERPINB3P29508 390 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 AP1S1P61966 158 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 ILF2Q12905 390 aaKnown RBP17.74■□□□□ 0.43
LMNA-208ENST00000448611 TSNAXIP1Q2TAA8 658 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 NAPRTQ6XQN6 538 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 CLNKQ7Z7G1 428 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 PIWIL2Q8TC59 973 aaKnown RBP17.74■□□□□ 0.43
LMNA-208ENST00000448611 TSPAN17Q96FV3 270 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 IGSF5Q9NSI5 407 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 ABCB8Q9NUT2 735 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 DNAJC16Q9Y2G8 782 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 VWA7Q9Y334 891 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 UNC5CO95185 931 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 CYBBP04839 570 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 HNRNPA1P09651 372 aaKnown RBP eCLIP17.74■□□□□ 0.43
LMNA-208ENST00000448611 TYSND1Q2T9J0 566 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 ARHGAP15Q53QZ3 475 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 PRSS36Q5K4E3 855 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 ZNF549Q6P9A3 640 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 SPATA6LQ8N4H0 392 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 LEMD2Q8NC56 503 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 PDCD6IPQ8WUM4 868 aaKnown RBP17.74■□□□□ 0.43
LMNA-208ENST00000448611 HEXDCQ8WVB3 486 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 SCYL1Q96KG9 808 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 TM6SF2Q9BZW4 377 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 XPR1Q9UBH6 696 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 PDE4DIPQ5VU43 2346 aa17.74■□□□□ 0.43
LMNA-208ENST00000448611 SOBPA7XYQ1 873 aa17.73■□□□□ 0.43
LMNA-208ENST00000448611 TMEM114B3SHH9 223 aa17.73■□□□□ 0.43
LMNA-208ENST00000448611 H0YHG0 523 aa17.73■□□□□ 0.43
LMNA-208ENST00000448611 H2AFYO75367 372 aaKnown RBP17.73■□□□□ 0.43
LMNA-208ENST00000448611 LPOP22079 712 aaPredicted RBP17.73■□□□□ 0.43
LMNA-208ENST00000448611 ABL2P42684 1182 aa17.73■□□□□ 0.43
LMNA-208ENST00000448611 STC1P52823 247 aa17.73■□□□□ 0.43
LMNA-208ENST00000448611 AQP5P55064 265 aa17.73■□□□□ 0.43
LMNA-208ENST00000448611 CDKN2DP55273 166 aa17.73■□□□□ 0.43
LMNA-208ENST00000448611 NTHL1P78549 312 aa17.73■□□□□ 0.43
LMNA-208ENST00000448611 PTPRRQ15256 657 aa17.73■□□□□ 0.43
LMNA-208ENST00000448611 CTC1Q2NKJ3 1217 aa17.73■□□□□ 0.43
LMNA-208ENST00000448611 AFTPHQ6ULP2 937 aa17.73■□□□□ 0.43
LMNA-208ENST00000448611 TBC1D1Q86TI0 1168 aaPredicted RBP17.73■□□□□ 0.43
LMNA-208ENST00000448611 TTC30BQ8N4P2 665 aa17.73■□□□□ 0.43
LMNA-208ENST00000448611 UBXN10Q96LJ8 280 aa17.73■□□□□ 0.43
LMNA-208ENST00000448611 SIKE1Q9BRV8 207 aa17.73■□□□□ 0.43
LMNA-208ENST00000448611 GATA5Q9BWX5 397 aaPredicted RBP17.73■□□□□ 0.43
LMNA-208ENST00000448611 TDP1Q9NUW8 608 aa17.73■□□□□ 0.43
LMNA-208ENST00000448611 CORO1CQ9ULV4 474 aaPredicted RBP17.73■□□□□ 0.43
LMNA-208ENST00000448611 CRYL1Q9Y2S2 319 aa17.73■□□□□ 0.43
LMNA-208ENST00000448611 ANKRD36A6QL64 1941 aa17.73■□□□□ 0.43
LMNA-208ENST00000448611 CXorf51AA0A1B0GTR3 108 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 XYLBO75191 536 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 ZNF821O75541 412 aaPredicted RBP17.72■□□□□ 0.43
LMNA-208ENST00000448611 PRAMEF12O95522 483 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 PENKP01210 267 aaPredicted RBP17.72■□□□□ 0.43
LMNA-208ENST00000448611 T-ENOLP0DO92 83 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 CSNK1DP48730 415 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 PITRM1Q5JRX3 1037 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 FAM45BPQ6NSW5 357 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 ASRGL1Q7L266 308 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 TMEM25Q86YD3 366 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 SPNS2Q8IVW8 549 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 TTC8Q8TAM2 541 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 FAM45AQ8TCE6 357 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 PPP4R1Q8TF05 950 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 SREK1Q8WXA9 508 aaKnown RBP17.72■□□□□ 0.43
LMNA-208ENST00000448611 WWP1Q9H0M0 922 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 MRPL46Q9H2W6 279 aaKnown RBP17.72■□□□□ 0.43
LMNA-208ENST00000448611 GPAMQ9HCL2 828 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 TXLNGQ9NUQ3 528 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 PCDHB9Q9Y5E1 797 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 NOTCH4Q99466 2003 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 GRXCR1A8MXD5 290 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 PGLSO95336 258 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 PRSS56P0CW18 603 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 HOXB8P17481 243 aaPredicted RBP17.72■□□□□ 0.43
LMNA-208ENST00000448611 FDXRP22570 491 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 HLA-FP30511 346 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 KPNA2P52292 529 aaKnown RBP17.72■□□□□ 0.43
LMNA-208ENST00000448611 PRKAA2P54646 552 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 CSHL1Q14406 222 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 LIPMQ5VYY2 423 aa17.72■□□□□ 0.43
LMNA-208ENST00000448611 FAM109BQ6ICB4 259 aaPredicted RBP17.72■□□□□ 0.43
LMNA-208ENST00000448611 SDCCAG8Q86SQ7 713 aaPredicted RBP17.72■□□□□ 0.43
LMNA-208ENST00000448611 METTL3Q86U44 580 aaKnown RBP17.72■□□□□ 0.43
LMNA-208ENST00000448611 CAMK1DQ8IU85 385 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms