RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 MBD1Q9UIS9 605 aaPredicted RBP7.58□□□□□ -1.2
AC004540.1-206ENST00000448056 TPX2Q9ULW0 747 aaKnown RBP7.58□□□□□ -1.2
AC004540.1-206ENST00000448056 CYP8B1Q9UNU6 501 aa7.58□□□□□ -1.2
AC004540.1-206ENST00000448056 FADS3Q9Y5Q0 445 aa7.58□□□□□ -1.2
AC004540.1-206ENST00000448056 TBC1D3DA0A087WVF3 549 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 TBC1D3IA0A087WXS9 549 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 TBC1D3EA0A087X179 549 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 TBC1D3KA0A087X1G2 549 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 A0A0J9YYE9 177 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 TCRBV7S3A2A0A539 114 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 TBC1D3FA6NER0 549 aaPredicted RBP7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 EFCAB8A8MWE9 144 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 A8MX80 341 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 TBC1D3LB9A6J9 549 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 NEMP1O14524 444 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 SPINT1O43278 529 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 TSPAN6O43657 245 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 TRBC1P01850 177 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 FGF1P05230 155 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 ALPIP09923 528 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 FBXO45P0C2W1 286 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 TBC1D3HP0C7X1 549 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 TPH1P17752 444 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 CTPS1P17812 591 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 HLA-DPA1P20036 260 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 TPSB2P20231 275 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 NFKBIAP25963 317 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 GRIA1P42261 906 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 CHRNA4P43681 627 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 GRIA4P48058 902 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 TERF1P54274 439 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 ADPRHP54922 357 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 DRG2P55039 364 aaKnown RBP7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 SLC7A5Q01650 507 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 SEMG2Q02383 582 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 PTSQ03393 145 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 ELP6Q0PNE2 266 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 MSLNQ13421 630 aaPredicted RBP7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 KCNJ11Q14654 390 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 TPSAB1Q15661 275 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 CDKN3Q16667 212 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 TMEM52BQ4KMG9 183 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 RNASEH2BQ5TBB1 312 aaKnown RBP7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 ANKRD22Q5VYY1 191 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 DUPD1Q68J44 220 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 TBC1D3GQ6DHY5 549 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 TBC1D3CQ6IPX1 549 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 NAPEPLDQ6IQ20 393 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 C8orf74Q6P047 294 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 NEK5Q6P3R8 708 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 CRTC1Q6UUV9 634 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 USP45Q70EL2 814 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 PCGF5Q86SE9 256 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 PPIL6Q8IXY8 311 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 TBC1D3Q8IZP1 549 aaPredicted RBP7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 CBARPQ8N350 705 aaPredicted RBP7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 NAT8LQ8N9F0 302 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 ZBTB44Q8NCP5 570 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 LRRN4CLQ8ND94 238 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 MCUQ8NE86 351 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 OR2T34Q8NGX1 318 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 MCCC1Q96RQ3 725 aaPredicted RBP7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 LYSMD1Q96S90 227 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 SRPK1Q96SB4 655 aaKnown RBP7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 HINFPQ9BQA5 517 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 TRIM31Q9BZY9 425 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 MAGEE1Q9HCI5 957 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 PREBQ9HCU5 417 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 CASS4Q9NQ75 786 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 RAPGEFL1Q9UHV5 662 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 GGT7Q9UJ14 662 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 ITM2BQ9Y287 266 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 SNX24Q9Y343 169 aa7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 UTP11Q9Y3A2 253 aaKnown RBP7.57□□□□□ -1.2
AC004540.1-206ENST00000448056 A0A0U1RQS6 177 aa7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 IGLON5A6NGN9 336 aa7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 CAPN8A6NHC0 703 aa7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 NPIPB15A6NHN6 443 aaPredicted RBP7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 FAM47DPA6NHR8 397 aa7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 LRRC72A6NJI9 287 aa7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 C10orf142B7Z368 130 aa7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 H0Y858 1186 aa7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 AP3B1O00203 1094 aa7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 DNALI1O14645 258 aaPredicted RBP7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 TP73O15350 636 aa7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 MMP20O60882 483 aa7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 NDUFS2O75306 463 aa7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 RPP40O75818 363 aaKnown RBP7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 SEC31AO94979 1220 aaKnown RBP7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 PCDH8O95206 1070 aa7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 SEMA4FO95754 770 aa7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 PIRTP0C851 137 aa7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 CYP2A6P11509 494 aaPredicted RBP7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 VARSP26640 1264 aaKnown RBP7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 VIPR1P32241 457 aa7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 CNR2P34972 360 aa7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 MMP12P39900 470 aa7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 RPL21P46778 160 aaKnown RBP7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 LIG3P49916 1009 aa7.56□□□□□ -1.2
AC004540.1-206ENST00000448056 RPS21P63220 83 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms