RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 PORCNQ9H237 461 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 SPC25Q9HBM1 224 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 ARIH1Q9Y4X5 557 aaPredicted RBP19.26■□□□□ 0.67
HMGA1-205ENST00000447654 CSADQ9Y600 493 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 KCNU1A8MYU2 1149 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 KCNK2O95069 426 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 MYL3P08590 195 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 MPSTP25325 297 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 GALK2Q01415 458 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 TNFAIP2Q03169 654 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 TOP3AQ13472 1001 aaPredicted RBP19.26■□□□□ 0.67
HMGA1-205ENST00000447654 SQLEQ14534 574 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 POU6F1Q14863 301 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 SULF1Q8IWU6 871 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 LGI2Q8N0V4 545 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 ROPN1LQ96C74 230 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 MYRFLQ96LU7 910 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 DACH2Q96NX9 599 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 IL12RB2Q99665 862 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 IRF2BPLQ9H1B7 796 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 RNF181Q9P0P0 153 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 BAG5Q9UL15 447 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 OAZ3Q9UMX2 235 aa19.26■□□□□ 0.67
HMGA1-205ENST00000447654 A0A0G2JLL6 359 aaPredicted RBP19.25■□□□□ 0.67
HMGA1-205ENST00000447654 HLA-DRAP01903 254 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 NAGAP17050 411 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 CRHBPP24387 322 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 HTR1BP28222 390 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 ARL2P36404 184 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 ETFBP38117 255 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 GP5P40197 560 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 KIZQ2M2Z5 673 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 NXNQ6DKJ4 435 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 LCN8Q6JVE9 175 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 PRMT9Q6P2P2 845 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 PRRT2Q7Z6L0 340 aaPredicted RBP19.25■□□□□ 0.67
HMGA1-205ENST00000447654 ADCK1Q86TW2 530 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 CLYBLQ8N0X4 340 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 PELI3Q8N2H9 469 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 TRPV3Q8NET8 790 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 PGBD4Q96DM1 585 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 SLC10A4Q96EP9 437 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 SLC25A23Q9BV35 468 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 MUC13Q9H3R2 512 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 PAK1IP1Q9NWT1 392 aaPredicted RBP19.25■□□□□ 0.67
HMGA1-205ENST00000447654 MOSPD1Q9UJG1 213 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 CAB39Q9Y376 341 aaPredicted RBP19.25■□□□□ 0.67
HMGA1-205ENST00000447654 GPSM3Q9Y4H4 160 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 EI24O14681 340 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 KCNN4O15554 427 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 GAS2O43903 313 aaKnown RBP19.25■□□□□ 0.67
HMGA1-205ENST00000447654 GPC4O75487 556 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 SMTNL2Q2TAL5 461 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 SEZ6Q53EL9 994 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 LIPMQ5VYY2 423 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 CLEC14AQ86T13 490 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 DEPDC7Q96QD5 511 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 CPNE1Q99829 537 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 CHID1Q9BWS9 393 aa19.25■□□□□ 0.67
HMGA1-205ENST00000447654 SHOXO15266 292 aa19.24■□□□□ 0.67
HMGA1-205ENST00000447654 NDST3O95803 873 aa19.24■□□□□ 0.67
HMGA1-205ENST00000447654 CLIC3O95833 236 aa19.24■□□□□ 0.67
HMGA1-205ENST00000447654 ALBP02768 609 aa19.24■□□□□ 0.67
HMGA1-205ENST00000447654 TGM2P21980 687 aa19.24■□□□□ 0.67
HMGA1-205ENST00000447654 YAP1P46937 504 aaKnown RBP19.24■□□□□ 0.67
HMGA1-205ENST00000447654 LIG4P49917 911 aa19.24■□□□□ 0.67
HMGA1-205ENST00000447654 NRLP54845 237 aa19.24■□□□□ 0.67
HMGA1-205ENST00000447654 TARBP2Q15633 366 aaKnown RBP19.24■□□□□ 0.67
HMGA1-205ENST00000447654 TMEM198Q66K66 360 aa19.24■□□□□ 0.67
HMGA1-205ENST00000447654 NEK5Q6P3R8 708 aa19.24■□□□□ 0.67
HMGA1-205ENST00000447654 CHST15Q7LFX5 561 aaPredicted RBP19.24■□□□□ 0.67
HMGA1-205ENST00000447654 SNX29P2Q8IUI4 249 aa19.24■□□□□ 0.67
HMGA1-205ENST00000447654 ARFGAP1Q8N6T3 406 aa19.24■□□□□ 0.67
HMGA1-205ENST00000447654 OR6F1Q8NGZ6 308 aa19.24■□□□□ 0.67
HMGA1-205ENST00000447654 MARVELD3Q96A59 401 aa19.24■□□□□ 0.67
HMGA1-205ENST00000447654 VPS35Q96QK1 796 aa19.24■□□□□ 0.67
HMGA1-205ENST00000447654 TARS2Q9BW92 718 aaKnown RBP19.24■□□□□ 0.67
HMGA1-205ENST00000447654 SNX15Q9NRS6 342 aa19.24■□□□□ 0.67
HMGA1-205ENST00000447654 NAALAD2Q9Y3Q0 740 aa19.24■□□□□ 0.67
HMGA1-205ENST00000447654 TEX51A0A1B0GUA7 166 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 CENPXA8MT69 81 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 ZW10O43264 779 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 ATP6V1B2P21281 511 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 ARL1P40616 181 aaPredicted RBP19.23■□□□□ 0.67
HMGA1-205ENST00000447654 MRPS15P82914 257 aaKnown RBP19.23■□□□□ 0.67
HMGA1-205ENST00000447654 RALGDSQ12967 914 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 POLD3Q15054 466 aaPredicted RBP19.23■□□□□ 0.67
HMGA1-205ENST00000447654 OR13J1Q8NGT2 312 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 PEX13Q92968 403 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 NIFKQ9BYG3 293 aaKnown RBP19.23■□□□□ 0.67
HMGA1-205ENST00000447654 B3GNT4Q9C0J1 378 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 MKRN2Q9H000 416 aaKnown RBP19.23■□□□□ 0.67
HMGA1-205ENST00000447654 ING2Q9H160 280 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 SYBUQ9NX95 663 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 MTMR10Q9NXD2 777 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 MCM3APO60318 1980 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 TTC24A2A3L6 582 aaPredicted RBP19.23■□□□□ 0.67
HMGA1-205ENST00000447654 EXTL3O43909 919 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 PIGNO95427 931 aa19.23■□□□□ 0.67
HMGA1-205ENST00000447654 DLGAP3O95886 979 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms