RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 TECRLQ5HYJ1 363 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 RINLQ6ZS11 566 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 BBS7Q8IWZ6 715 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 TXNDC5Q8NBS9 432 aaKnown RBP17.49■□□□□ 0.39
SMC6-206ENST00000446852 TTC8Q8TAM2 541 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 TSPAN17Q96FV3 270 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 CATSPERZQ9NTU4 200 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 DNMT3BQ9UBC3 853 aaKnown RBP17.49■□□□□ 0.39
SMC6-206ENST00000446852 FCF1Q9Y324 198 aaKnown RBP17.49■□□□□ 0.39
SMC6-206ENST00000446852 MT-CO1P00395 513 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 ENO1P06733 434 aaKnown RBP17.49■□□□□ 0.39
SMC6-206ENST00000446852 RCN2Q14257 317 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 FAM83EQ2M2I3 478 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 MRNIPQ6NTE8 343 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 TDRD5Q8NAT2 981 aaKnown RBP17.49■□□□□ 0.39
SMC6-206ENST00000446852 KREMEN2Q8NCW0 462 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 OR4K2Q8NGD2 314 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 MAPK15Q8TD08 544 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 BTBD10Q9BSF8 475 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 CADM1Q9BY67 442 aaKnown RBP17.49■□□□□ 0.39
SMC6-206ENST00000446852 COG4Q9H9E3 785 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 STK39Q9UEW8 545 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 APOBEC2Q9Y235 224 aaKnown RBP17.49■□□□□ 0.39
SMC6-206ENST00000446852 SSX2IPQ9Y2D8 614 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 MYO7AQ13402 2215 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 NEMP2A6NFY4 417 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 PRR5-ARHGAP8B1AHC4 643 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 SLC4A1P02730 911 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 SLC8A1P32418 973 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 PRKAA2P54646 552 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 ERVFC1P60507 584 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 SLC7A9P82251 487 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 ARHGAP8P85298 464 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 TIAL1Q01085 375 aaKnown RBP eCLIP17.48■□□□□ 0.39
SMC6-206ENST00000446852 TAF1AQ15573 450 aaPredicted RBP17.48■□□□□ 0.39
SMC6-206ENST00000446852 INO80DQ53TQ3 878 aaPredicted RBP17.48■□□□□ 0.39
SMC6-206ENST00000446852 ARL13AQ5H913 290 aaPredicted RBP17.48■□□□□ 0.39
SMC6-206ENST00000446852 NCEH1Q6PIU2 408 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 MFN1Q8IWA4 741 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 APCDD1Q8J025 514 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 LSMEM2Q8N112 164 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 SLC22A17Q8WUG5 538 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 PDCD6IPQ8WUM4 868 aaKnown RBP17.48■□□□□ 0.39
SMC6-206ENST00000446852 PLK2Q9NYY3 685 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 LSM7Q9UK45 103 aaKnown RBP17.48■□□□□ 0.39
SMC6-206ENST00000446852 CLEC4EQ9ULY5 219 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 CHD9Q3L8U1 2897 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 ANKRD66B4E2M5 251 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 K7ERQ8 282 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 DIAPH2O60879 1101 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 ADH1AP07327 375 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 LTA4HP09960 611 aaKnown RBP17.48■□□□□ 0.39
SMC6-206ENST00000446852 CPA2P48052 419 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 STC1P52823 247 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 ATXN7L2Q5T6C5 722 aaPredicted RBP17.48■□□□□ 0.39
SMC6-206ENST00000446852 HTR3DQ70Z44 454 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 DCAF4L2Q8NA75 395 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 DDI1Q8WTU0 396 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 SMG9Q9H0W8 520 aaKnown RBP17.48■□□□□ 0.39
SMC6-206ENST00000446852 FAM96AQ9H5X1 160 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 TAS2R1Q9NYW7 299 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 RAP2CQ9Y3L5 183 aa17.48■□□□□ 0.39
SMC6-206ENST00000446852 HIDE1A8MVS5 230 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 PIGNO95427 931 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 OGNP20774 298 aaKnown RBP17.47■□□□□ 0.39
SMC6-206ENST00000446852 KCNA5P22460 613 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 KPNA2P52292 529 aaKnown RBP17.47■□□□□ 0.39
SMC6-206ENST00000446852 RHOAP61586 193 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 TYSND1Q2T9J0 566 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 AGAP9Q5VTM2 703 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 FAM45BPQ6NSW5 357 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 EPGNQ6UW88 154 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 CCDC149Q6ZUS6 474 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 FAM13CQ8NE31 585 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 FBXO27Q8NI29 283 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 FAM45AQ8TCE6 357 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 TCF25Q9BQ70 676 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 CORO1BQ9BR76 489 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 ILKAPQ9H0C8 392 aaPredicted RBP17.47■□□□□ 0.39
SMC6-206ENST00000446852 A0A0U1RQS6 177 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 LCHNA4D1U4 455 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 FGBP02675 491 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 MYL4P12829 197 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 FDXRP22570 491 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 CCR2P41597 374 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 SLC9B1Q4ZJI4 515 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 GPR158Q5T848 1215 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 ADGRE3Q9BY15 652 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 SHCBP1LQ9BZQ2 653 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 POMKQ9H5K3 350 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 CD248Q9HCU0 757 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 MAN1C1Q9NR34 630 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 HCFC1R1Q9NWW0 138 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 SH3BP1Q9Y3L3 701 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 INSL6Q9Y581 213 aa17.47■□□□□ 0.39
SMC6-206ENST00000446852 CCL16O15467 120 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 PSMA3P25788 255 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 ABL2P42684 1182 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 PFKPQ01813 784 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 SLC20A2Q08357 652 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms