RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 MYO1AQ9UBC5 1043 aa15.5■□□□□ 0.07
SEC13-213ENST00000445064 CNOT8Q9UFF9 292 aaKnown RBP15.5■□□□□ 0.07
SEC13-213ENST00000445064 ATXN7L1Q9ULK2 861 aaPredicted RBP15.5■□□□□ 0.07
SEC13-213ENST00000445064 MYO6Q9UM54 1294 aa15.5■□□□□ 0.07
SEC13-213ENST00000445064 LRP4O75096 1905 aa15.5■□□□□ 0.07
SEC13-213ENST00000445064 GCN1Q92616 2671 aaKnown RBP15.49■□□□□ 0.07
SEC13-213ENST00000445064 D6RAR5 112 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 DDX3XO00571 662 aaKnown RBP eCLIP15.49■□□□□ 0.075e-9■■■□□ 15.5
SEC13-213ENST00000445064 LRCH4O75427 683 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 ITGA2BP08514 1039 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 HGFP14210 728 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 GLB1P16278 677 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 SLC5A2P31639 672 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 TRIM23P36406 574 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 MLLT3P42568 568 aaPredicted RBP15.49■□□□□ 0.07
SEC13-213ENST00000445064 HCAR3P49019 387 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 KIAA1024LP59773 190 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 TYRO3Q06418 890 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 LBRQ14739 615 aaKnown RBP15.49■□□□□ 0.07
SEC13-213ENST00000445064 ASIC2Q16515 512 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 PNCKQ6P2M8 343 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 JAMLQ86YT9 394 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 WBP1Q96G27 269 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 PSKH2Q96QS6 385 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 STRADBQ9C0K7 418 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 DPEP2Q9H4A9 486 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 CYP4F12Q9HCS2 524 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 LRIT1Q9P2V4 623 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 PCDHGC4Q9Y5F7 938 aa15.49■□□□□ 0.07
SEC13-213ENST00000445064 TMX2-CTNND1H3BSU7 103 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 EFSO43281 561 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 NOBOXO60393 691 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 HOXC4P09017 264 aaPredicted RBP15.48■□□□□ 0.07
SEC13-213ENST00000445064 GZMAP12544 262 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 SKILP12757 684 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 AMPD1P23109 780 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 KELP23276 732 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 RENBPP51606 427 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 DPYSQ14117 519 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 E4F1Q66K89 784 aaPredicted RBP15.48■□□□□ 0.07
SEC13-213ENST00000445064 DENND2CQ68D51 928 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 CCNJLQ8IV13 435 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 PSTKQ8IV42 348 aaKnown RBP15.48■□□□□ 0.07
SEC13-213ENST00000445064 LZTR1Q8N653 840 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 FNIP1Q8TF40 1166 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 PDCD6IPQ8WUM4 868 aaKnown RBP15.48■□□□□ 0.07
SEC13-213ENST00000445064 ZNF653Q96CK0 615 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 TMEM74Q96NL1 305 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 AIPL1Q9NZN9 384 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 B4GALT6Q9UBX8 382 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 SEPT3Q9UH03 358 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 APPL1Q9UKG1 709 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 RNF215Q9Y6U7 377 aa15.48■□□□□ 0.07
SEC13-213ENST00000445064 MGAQ8IWI9 3026 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.47■□□□□ 0.07
SEC13-213ENST00000445064 B4DGG1 531 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 TNFRSF10CO14798 259 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 IL1R2P27930 398 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 ANP32AP39687 249 aaKnown RBP15.47■□□□□ 0.07
SEC13-213ENST00000445064 AP1S1P61966 158 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 KLHL30Q0D2K2 578 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 EIF3IQ13347 325 aaKnown RBP15.47■□□□□ 0.07
SEC13-213ENST00000445064 PTPRRQ15256 657 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 TGIF1Q15583 401 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 ANO6Q4KMQ2 910 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 C14orf28Q4W4Y0 310 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 CERCAMQ5T4B2 595 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 CCDC183Q5T5S1 534 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 TMCO4Q5TGY1 634 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 PGBD5Q8N414 524 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 COQ10AQ96MF6 247 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 ZNF599Q96NL3 588 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 CCNL2Q96S94 520 aaPredicted RBP15.47■□□□□ 0.07
SEC13-213ENST00000445064 WDR26Q9H7D7 661 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 SUDS3Q9H7L9 328 aaPredicted RBP15.47■□□□□ 0.07
SEC13-213ENST00000445064 ZWILCHQ9H900 591 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 SPATS2LQ9NUQ6 558 aaKnown RBP15.47■□□□□ 0.07
SEC13-213ENST00000445064 ETNK2Q9NVF9 386 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 PISDQ9UG56 409 aa15.47■□□□□ 0.07
SEC13-213ENST00000445064 PRSS38A1L453 326 aa15.46■□□□□ 0.07
SEC13-213ENST00000445064 CAPN8A6NHC0 703 aa15.46■□□□□ 0.07
SEC13-213ENST00000445064 GOLGA6L22H0YM25 854 aa15.46■□□□□ 0.07
SEC13-213ENST00000445064 PEX11BO96011 259 aa15.46■□□□□ 0.07
SEC13-213ENST00000445064 FUCA1P04066 466 aa15.46■□□□□ 0.07
SEC13-213ENST00000445064 JMJD7P0C870 316 aa15.46■□□□□ 0.07
SEC13-213ENST00000445064 KRT10P13645 584 aa15.46■□□□□ 0.07
SEC13-213ENST00000445064 TCF4P15884 667 aa15.46■□□□□ 0.07
SEC13-213ENST00000445064 PNLIPP16233 465 aa15.46■□□□□ 0.07
SEC13-213ENST00000445064 ITIH1P19827 911 aa15.46■□□□□ 0.07
SEC13-213ENST00000445064 CCKBRP32239 447 aa15.46■□□□□ 0.07
SEC13-213ENST00000445064 ZNF135P52742 658 aaPredicted RBP15.46■□□□□ 0.07
SEC13-213ENST00000445064 ZFP36L1Q07352 338 aaKnown RBP15.46■□□□□ 0.07
SEC13-213ENST00000445064 ARHGEF7Q14155 803 aa15.46■□□□□ 0.07
SEC13-213ENST00000445064 HLTFQ14527 1009 aaKnown RBP eCLIP15.46■□□□□ 0.07
SEC13-213ENST00000445064 ZNF235Q14590 738 aa15.46■□□□□ 0.07
SEC13-213ENST00000445064 CNGA3Q16281 694 aa15.46■□□□□ 0.07
SEC13-213ENST00000445064 SMTNL2Q2TAL5 461 aa15.46■□□□□ 0.07
SEC13-213ENST00000445064 SPECC1LQ69YQ0 1117 aa15.46■□□□□ 0.07
SEC13-213ENST00000445064 TMPRSS9Q7Z410 1059 aa15.46■□□□□ 0.07
SEC13-213ENST00000445064 HSPH1Q92598 858 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms