RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 ITGA2BP08514 1039 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 F7P08709 466 aaPredicted RBP9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 ALPIP09923 528 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 LPOP22079 712 aaPredicted RBP9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 SPRP35270 261 aaPredicted RBP9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 EIF2DP41214 584 aaKnown RBP9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 SLC1A2P43004 574 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 ARSDP51689 593 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 ZNF140P52738 457 aaPredicted RBP9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 GUCY1A3Q02108 690 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 CTBP1Q13363 440 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 PTPRRQ15256 657 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 TTC19Q6DKK2 380 aaPredicted RBP9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 GDPD4Q6W3E5 623 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 NUDT18Q6ZVK8 323 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 PTAR1Q7Z6K3 402 aaPredicted RBP9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 DENND6AQ8IWF6 608 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 SFTPA1Q8IWL2 248 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 CNTN4Q8IWV2 1026 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 NDUFAF2Q8N183 169 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 ANKRD42Q8N9B4 389 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 MDGA1Q8NFP4 955 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 OR4K2Q8NGD2 314 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 CSGALNACT1Q8TDX6 532 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 TBATAQ96M53 351 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 RBBP8Q99708 897 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 HEPHQ9BQS7 1158 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 CAPS2Q9BXY5 557 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 GPR63Q9BZJ6 419 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 MTG2Q9H4K7 406 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 MAGEE1Q9HCI5 957 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 POLR3BQ9NW08 1133 aaPredicted RBP9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 NKIRAS1Q9NYS0 192 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 GGT7Q9UJ14 662 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 SMG5Q9UPR3 1016 aaKnown RBP9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 ZNF711Q9Y462 761 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 KIAA1549LQ6ZVL6 1849 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 COL4A3Q01955 1670 aa9.53□□□□□ -0.88
SMPD4P1-203ENST00000443839 A0A0J9YYE9 177 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 C1orf232A0A0U1RR37 186 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 GRXCR2A6NFK2 248 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 CAPN8A6NHC0 703 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 FAM47DPA6NHR8 397 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 WASH3PC4AMC7 463 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 ANHXE9PGG2 379 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 ARNTLO00327 626 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 STX7O15400 261 aaKnown RBP9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 TRBC1P01850 177 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 BMP1P13497 986 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 CHN1P15882 459 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 ABCG1P45844 678 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 LIMK2P53671 638 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 CSE1LP55060 971 aaKnown RBP9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 ACVR1Q04771 509 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 AAK1Q2M2I8 961 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 FOXR1Q6PIV2 292 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 SERPINA13PQ6UXR4 307 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 USP45Q70EL2 814 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 LYSMD3Q7Z3D4 306 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 ZSWIM9Q86XI8 627 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 PHTF2Q8N3S3 785 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 MGARPQ8TDB4 240 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 ALKBH8Q96BT7 664 aaKnown RBP9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 ECHDC3Q96DC8 303 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 SERAC1Q96JX3 654 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 KLHL32Q96NJ5 620 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 SRPK1Q96SB4 655 aaKnown RBP9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 MFSD1Q9H3U5 465 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 SUDS3Q9H7L9 328 aaPredicted RBP9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 UBE2ZQ9H832 354 aaPredicted RBP9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 NLE1Q9NVX2 485 aaPredicted RBP9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 IL36AQ9UHA7 158 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 FBXO5Q9UKT4 447 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 RIMKLBQ9ULI2 386 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 FNDC3AQ9Y2H6 1198 aaKnown RBP9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 PKP3Q9Y446 797 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 A0A0U1RQS6 177 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 A0A1W2PQ67 120 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 HMX2A2RU54 273 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 CCDC162PA2VCL2 907 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 OR51F1A6NGY5 319 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 SIN3BO75182 1162 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 LEFTY1O75610 366 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 GOT2P00505 430 aaKnown RBP9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 APODP05090 189 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 HNF1BP35680 557 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 MDH1P40925 334 aaKnown RBP9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 GRIA2P42262 883 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 SOX9P48436 509 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 POLR2LP62875 67 aaKnown RBP9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 MPP1Q00013 466 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 DNAJC3Q13217 504 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 SMAD4Q13485 552 aaKnown RBP9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 ZNF234Q14588 700 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 ARSIQ5FYB1 569 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 FSTL4Q6MZW2 842 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 MRNIPQ6NTE8 343 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 KIAA0408Q6ZU52 694 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 LMNTD2Q8IXW0 634 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 KDM1BQ8NB78 822 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms