RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 AFMIDQ63HM1 303 aa13.86□□□□□ -0.19
PTPRE-203ENST00000442830 LIPIQ6XZB0 460 aa13.86□□□□□ -0.19
PTPRE-203ENST00000442830 RFX8Q6ZV50 586 aa13.86□□□□□ -0.19
PTPRE-203ENST00000442830 JAMLQ86YT9 394 aa13.86□□□□□ -0.19
PTPRE-203ENST00000442830 CAMK1DQ8IU85 385 aa13.86□□□□□ -0.19
PTPRE-203ENST00000442830 FAM46DQ8NEK8 389 aa13.86□□□□□ -0.19
PTPRE-203ENST00000442830 PDXPQ96GD0 296 aa13.86□□□□□ -0.19
PTPRE-203ENST00000442830 PSKH2Q96QS6 385 aa13.86□□□□□ -0.19
PTPRE-203ENST00000442830 DHX35Q9H5Z1 703 aaKnown RBP13.86□□□□□ -0.19
PTPRE-203ENST00000442830 PHPT1Q9NRX4 125 aaPredicted RBP13.86□□□□□ -0.19
PTPRE-203ENST00000442830 PCDHB11Q9Y5F2 797 aa13.86□□□□□ -0.19
PTPRE-203ENST00000442830 SCINQ9Y6U3 715 aa13.86□□□□□ -0.19
PTPRE-203ENST00000442830 PIEZO2Q9H5I5 2752 aa13.85□□□□□ -0.19
PTPRE-203ENST00000442830 A0A1W2PQC6 194 aa13.85□□□□□ -0.19
PTPRE-203ENST00000442830 J3KR12 359 aa13.85□□□□□ -0.19
PTPRE-203ENST00000442830 PSMD11O00231 422 aa13.85□□□□□ -0.19
PTPRE-203ENST00000442830 BUB1BO60566 1050 aaPredicted RBP13.85□□□□□ -0.19
PTPRE-203ENST00000442830 CELA2BP08218 269 aaPredicted RBP13.85□□□□□ -0.19
PTPRE-203ENST00000442830 MYCLP1P12525 358 aaPredicted RBP13.85□□□□□ -0.19
PTPRE-203ENST00000442830 ITIH2P19823 946 aa13.85□□□□□ -0.19
PTPRE-203ENST00000442830 TEAD1P28347 426 aa13.85□□□□□ -0.19
PTPRE-203ENST00000442830 ZFP36L1Q07352 338 aaKnown RBP13.85□□□□□ -0.19
PTPRE-203ENST00000442830 MAMLD1Q13495 774 aa13.85□□□□□ -0.19
PTPRE-203ENST00000442830 HLTFQ14527 1009 aaKnown RBP eCLIP13.85□□□□□ -0.19
PTPRE-203ENST00000442830 PLEKHA7Q6IQ23 1121 aa13.85□□□□□ -0.19
PTPRE-203ENST00000442830 USP53Q70EK8 1073 aa13.85□□□□□ -0.19
PTPRE-203ENST00000442830 SPRED1Q7Z699 444 aa13.85□□□□□ -0.19
PTPRE-203ENST00000442830 TSEN2Q8NCE0 465 aaKnown RBP13.85□□□□□ -0.19
PTPRE-203ENST00000442830 NSMCE1Q8WV22 266 aa13.85□□□□□ -0.19
PTPRE-203ENST00000442830 FUBP1Q96AE4 644 aaKnown RBP13.85□□□□□ -0.19
PTPRE-203ENST00000442830 SGF29Q96ES7 293 aa13.85□□□□□ -0.19
PTPRE-203ENST00000442830 CELF6Q96J87 481 aaKnown RBP13.85□□□□□ -0.19
PTPRE-203ENST00000442830 GBP4Q96PP9 640 aa13.85□□□□□ -0.19
PTPRE-203ENST00000442830 DPYSL5Q9BPU6 564 aa13.85□□□□□ -0.19
PTPRE-203ENST00000442830 GSDMCQ9BYG8 508 aa13.85□□□□□ -0.19
PTPRE-203ENST00000442830 SLC39A8Q9C0K1 460 aa13.85□□□□□ -0.19
PTPRE-203ENST00000442830 MRPL47Q9HD33 250 aaKnown RBP13.85□□□□□ -0.19
PTPRE-203ENST00000442830 HAUS2Q9NVX0 235 aa13.85□□□□□ -0.19
PTPRE-203ENST00000442830 LOXL2Q9Y4K0 774 aa13.85□□□□□ -0.19
PTPRE-203ENST00000442830 A0A1W2PQM1 296 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 PRSS38A1L453 326 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 GOLGA6L22H0YM25 854 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 DFFAO00273 331 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 HGSO14964 777 aaPredicted RBP13.84□□□□□ -0.19
PTPRE-203ENST00000442830 MYBL1P10243 752 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 CYP2A6P11509 494 aaPredicted RBP13.84□□□□□ -0.19
PTPRE-203ENST00000442830 GZMAP12544 262 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 ERCC2P18074 760 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 ARL4AP40617 200 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 ILF3Q12906 894 aaKnown RBP eCLIP13.84□□□□□ -0.19
PTPRE-203ENST00000442830 RALGDSQ12967 914 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 ZNF235Q14590 738 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 LBRQ14739 615 aaKnown RBP13.84□□□□□ -0.19
PTPRE-203ENST00000442830 MAP9Q49MG5 647 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 SPECC1LQ69YQ0 1117 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 PNCKQ6P2M8 343 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 B3GNT8Q7Z7M8 397 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 NDUFAF2Q8N183 169 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 OR1E3Q8WZA6 343 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 NUS1Q96E22 293 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 SNRNP25Q9BV90 132 aaKnown RBP13.84□□□□□ -0.19
PTPRE-203ENST00000442830 NAT10Q9H0A0 1025 aaKnown RBP13.84□□□□□ -0.19
PTPRE-203ENST00000442830 DPEP2Q9H4A9 486 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 FGF22Q9HCT0 170 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 TRNAU1APQ9NX07 287 aaKnown RBP13.84□□□□□ -0.19
PTPRE-203ENST00000442830 LRIT1Q9P2V4 623 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 PISDQ9UG56 409 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 RABGEF1Q9UJ41 708 aa13.84□□□□□ -0.19
PTPRE-203ENST00000442830 HEMK1Q9Y5R4 338 aaPredicted RBP13.84□□□□□ -0.19
PTPRE-203ENST00000442830 TMEM202A6NGA9 273 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 B4DGG1 531 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 H3BRJ5 948 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 TRAFD1O14545 582 aaPredicted RBP13.83□□□□□ -0.2
PTPRE-203ENST00000442830 HTRA2O43464 458 aaPredicted RBP13.83□□□□□ -0.2
PTPRE-203ENST00000442830 NOBOXO60393 691 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 CPNE6O95741 557 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 PYGLP06737 847 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 CCNB1P14635 433 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 VIPR1P32241 457 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 SERPINB6P35237 376 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 PCK1P35558 622 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 GPR3P46089 330 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 SCNN1BP51168 640 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 BIRC2Q13490 618 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 TRA2AQ13595 282 aaKnown RBP eCLIP13.83□□□□□ -0.2
PTPRE-203ENST00000442830 LY6DQ14210 128 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 ACOX1Q15067 660 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 PPP6R3Q5H9R7 873 aaPredicted RBP13.83□□□□□ -0.2
PTPRE-203ENST00000442830 MANEAQ5SRI9 462 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 PIM3Q86V86 326 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 ZSWIM9Q86XI8 627 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 LRRC49Q8IUZ0 686 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 ARHGAP12Q8IWW6 846 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 PLA2G15Q8NCC3 412 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 CCDC112Q8NEF3 446 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 GPBAR1Q8TDU6 330 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 ARHGAP9Q9BRR9 750 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 FOXP3Q9BZS1 431 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 CYP4F12Q9HCS2 524 aa13.83□□□□□ -0.2
PTPRE-203ENST00000442830 LMBRD1Q9NUN5 540 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms