RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 TEDDM1Q5T9Z0 273 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 KCTD16Q68DU8 428 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 TRMT10BQ6PF06 316 aaKnown RBP9.12□□□□□ -0.95
NR1I3-211ENST00000442691 PACS1Q6VY07 963 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 LEKR1Q6ZMV7 388 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 CAPN12Q6ZSI9 719 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 USP45Q70EL2 814 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 RASSF3Q86WH2 238 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 CTAGE3PQ8IX95 158 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 PPM1NQ8N819 430 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 DTX3LQ8TDB6 740 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 DNASE1L2Q92874 299 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 RMDN1Q96DB5 314 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 MFSD3Q96ES6 412 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 CABS1Q96KC9 395 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 FCRL3Q96P31 734 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-211ENST00000442691 RBBP8Q99708 897 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 CDH19Q9H159 772 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 RHOJQ9H4E5 214 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 CCDC134Q9H6E4 229 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 FBRSQ9HAH7 460 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 C20orf96Q9NUD7 363 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-211ENST00000442691 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-211ENST00000442691 BCCIPQ9P287 314 aaKnown RBP eCLIP9.12□□□□□ -0.95
NR1I3-211ENST00000442691 PHTF1Q9UMS5 762 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 PLA2G4CQ9UP65 541 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 STARD13Q9Y3M8 1113 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 USP15Q9Y4E8 981 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-211ENST00000442691 MAP4K5Q9Y4K4 846 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 PCDHB11Q9Y5F2 797 aa9.12□□□□□ -0.95
NR1I3-211ENST00000442691 COL4A3Q01955 1670 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 KIAA1549LQ6ZVL6 1849 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 A0A0J9YYE9 177 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 EDDM13A0A1B0GTR0 161 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 FAM47DPA6NHR8 397 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 SMIM23A6NLE4 172 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 K7ERQ8 282 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 ZWINTO95229 277 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 TRBC1P01850 177 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 MT-ND3P03897 115 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 PRNPP04156 253 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 HNRNPLP14866 589 aaKnown RBP eCLIP9.11□□□□□ -0.95
NR1I3-211ENST00000442691 BRAFP15056 766 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 ARSAP15289 507 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 ZNF30P17039 623 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 TPH1P17752 444 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 LPOP22079 712 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-211ENST00000442691 ARNTP27540 789 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 NMBRP28336 390 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 HMGCLP35914 325 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 GRIA2P42262 883 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 MAGEA12P43365 314 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 TNFRSF4P43489 277 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 SERPINB8P50452 374 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 CCNHP51946 323 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-211ENST00000442691 EPHB1P54762 984 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 PRAMEP78395 509 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 SLC18A2Q05940 514 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 MTM1Q13496 603 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 OLIG2Q13516 323 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 ENPP2Q13822 863 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 SEPT6Q14141 434 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 ADGRE1Q14246 886 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 ELAVL3Q14576 367 aaKnown RBP9.11□□□□□ -0.95
NR1I3-211ENST00000442691 CNGA3Q16281 694 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 GEN1Q17RS7 908 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 INSCQ1MX18 579 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 RNF187Q5TA31 235 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-211ENST00000442691 TMEM215Q68D42 235 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 MRNIPQ6NTE8 343 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 ESRP1Q6NXG1 681 aaKnown RBP9.11□□□□□ -0.95
NR1I3-211ENST00000442691 AFTPHQ6ULP2 937 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 GLT6D1Q7Z4J2 308 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 DSG4Q86SJ6 1040 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 SRRM1Q8IYB3 904 aaKnown RBP9.11□□□□□ -0.95
NR1I3-211ENST00000442691 CBARPQ8N350 705 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-211ENST00000442691 SLC25A41Q8N5S1 370 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 C2CD4AQ8NCU7 369 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-211ENST00000442691 LPCAT1Q8NF37 534 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 OR13J1Q8NGT2 312 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 OR2A12Q8NGT7 310 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 PIH1D2Q8WWB5 315 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 SCRN2Q96FV2 425 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 EXOC2Q96KP1 924 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 GPR22Q99680 433 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 HEPHQ9BQS7 1158 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 TM6SF2Q9BZW4 377 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 EBF3Q9H4W6 596 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 PPANQ9NQ55 473 aaKnown RBP9.11□□□□□ -0.95
NR1I3-211ENST00000442691 SMYD2Q9NRG4 433 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 RAD18Q9NS91 495 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 INTS10Q9NVR2 710 aaKnown RBP9.11□□□□□ -0.95
NR1I3-211ENST00000442691 NKIRAS1Q9NYS0 192 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 NFKBIL1Q9UBC1 381 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-211ENST00000442691 CTNNAL1Q9UBT7 734 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 CHKBQ9Y259 395 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 PCDHGC4Q9Y5F7 938 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 ACTL7AQ9Y615 435 aa9.11□□□□□ -0.95
NR1I3-211ENST00000442691 MUC22E2RYF6 1773 aaPredicted RBP9.1□□□□□ -0.95
NR1I3-211ENST00000442691 MYO18AQ92614 2054 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms