RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 TEAD1P28347 426 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 SCNN1BP51168 640 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 ARHGEF7Q14155 803 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 KRT81Q14533 505 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 INPP5AQ14642 412 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 NR1I3Q14994 352 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 ACOX1Q15067 660 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 IRF4Q15306 451 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 WSCD2Q2TBF2 565 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 TDRD12Q587J7 1177 aaKnown RBP7.81□□□□□ -1.16
CD44-211ENST00000442151 CCDC122Q5T0U0 273 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 MARC1Q5VT66 337 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 AFMIDQ63HM1 303 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 DPPA4Q7L190 304 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 APTXQ7Z2E3 356 aaKnown RBP7.81□□□□□ -1.16
CD44-211ENST00000442151 MARCH9Q86YJ5 346 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 KRTAP1-3Q8IUG1 177 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 OR56A4Q8NGH8 313 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 NUDCD1Q96RS6 583 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 DPYSL5Q9BPU6 564 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 PDFQ9HBH1 243 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 ITM2BQ9Y287 266 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 ACTL7AQ9Y615 435 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 IGF2RP11717 2491 aa7.81□□□□□ -1.16
CD44-211ENST00000442151 MUSKO15146 869 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 INSIG1O15503 277 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 TEX33O43247 280 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 PIGNO95427 931 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 GLB1P16278 677 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 MX2P20592 715 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 VIPR1P32241 457 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 MMP12P39900 470 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 UBASH3AP57075 661 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 ZBED6P86452 979 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 CCDC173Q0VFZ6 552 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 C1orf61Q13536 156 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 NFKBIBQ15653 356 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 DPYSL2Q16555 572 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 SOWAHCQ53LP3 525 aaPredicted RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 RAB6CQ53S08 254 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 ARMC12Q5T9G4 340 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 TMEM164Q5U3C3 297 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 GUSBP11Q6P575 273 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 LIPIQ6XZB0 460 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 USP45Q70EL2 814 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 RD3Q7Z3Z2 195 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 TAF8Q7Z7C8 310 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 NLRP8Q86W28 1048 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 CAMK1DQ8IU85 385 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 ATPAF2Q8N5M1 289 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 NIPA2Q8N8Q9 360 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 ECHDC3Q96DC8 303 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 CELF6Q96J87 481 aaKnown RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 FCRL3Q96P31 734 aaPredicted RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 GFM1Q96RP9 751 aaKnown RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 KCTD15Q96SI1 283 aaPredicted RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 RBM15Q96T37 977 aaKnown RBP eCLIP7.8□□□□□ -1.16
CD44-211ENST00000442151 CCDC3Q9BQI4 270 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 GSDMCQ9BYG8 508 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 B3GNT4Q9C0J1 378 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 KLC2Q9H0B6 622 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 RAB6CQ9H0N0 254 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 MBNL1Q9NR56 388 aaKnown RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 ZNHIT6Q9NWK9 470 aaKnown RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 SEPT10Q9P0V9 454 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 LUC7L2Q9Y383 392 aaKnown RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 URB1O60287 2271 aaKnown RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 ZFYVE26Q68DK2 2539 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 GOLGA4Q13439 2230 aaKnown RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 CHD5Q8TDI0 1954 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 ERVH48-1M5A8F1 160 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 RNF103O00237 685 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 ATXN7O15265 892 aaPredicted RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 SPINT1O43278 529 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 CBFA2T2O43439 604 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 TLX3O43711 291 aaPredicted RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 LRCH4O75427 683 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 RECQL5O94762 991 aaPredicted RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 CPP00450 1065 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 PCCBP05166 539 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 TRIM23P36406 574 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 SSR1P43307 286 aaKnown RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 INHBCP55103 352 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 ILF3Q12906 894 aaKnown RBP eCLIP7.8□□□□□ -1.16
CD44-211ENST00000442151 COL9A2Q14055 689 aaPredicted RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 PDK2Q15119 407 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 ALG11Q2TAA5 492 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 ODF2Q5BJF6 829 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 PNCKQ6P2M8 343 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 OGFOD3Q6PK18 319 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 ZNF571Q7Z3V5 609 aaPredicted RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 FBXO39Q8N4B4 442 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 TSEN2Q8NCE0 465 aaKnown RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 FAM46DQ8NEK8 389 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 HSPH1Q92598 858 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 TSACCQ96A04 125 aaPredicted RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 LIN37Q96GY3 246 aaPredicted RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 EXOC2Q96KP1 924 aa7.8□□□□□ -1.16
CD44-211ENST00000442151 ZNF830Q96NB3 372 aaPredicted RBP7.8□□□□□ -1.16
CD44-211ENST00000442151 SLC46A1Q96NT5 459 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms