RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 MAP10Q9P2G4 905 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 CPQQ9Y646 472 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 FAM72CH0Y354 149 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 LGALS2P05162 132 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 GRSF1Q12849 480 aaKnown RBP eCLIP20.35■□□□□ 0.85
SHOX2-203ENST00000441443 CYP51A1Q16850 503 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 FAM72AQ5TYM5 149 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 KCTD11Q693B1 232 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 FAM72DQ6L9T8 149 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 PIWIL3Q7Z3Z3 882 aaKnown RBP20.35■□□□□ 0.85
SHOX2-203ENST00000441443 FAM72BQ86X60 149 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 ADGRG5Q8IZF4 528 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 HPS1Q92902 700 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 FEM1CQ96JP0 617 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 CD320Q9NPF0 282 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 IQCA1LA6NCM1 817 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 EEF2KO00418 725 aaKnown RBP20.35■□□□□ 0.85
SHOX2-203ENST00000441443 RPS9P46781 194 aaKnown RBP20.35■□□□□ 0.85
SHOX2-203ENST00000441443 HLCSP50747 726 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 TMEM214Q6NUQ4 689 aaKnown RBP20.35■□□□□ 0.85
SHOX2-203ENST00000441443 ZUFSPQ96AP4 578 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 TDRD1Q9BXT4 1180 aaKnown RBP20.35■□□□□ 0.85
SHOX2-203ENST00000441443 LHPPQ9H008 270 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 C22orf31O95567 290 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 NCK1P16333 377 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 ARF4P18085 180 aaPredicted RBP20.35■□□□□ 0.85
SHOX2-203ENST00000441443 ATP5F1P24539 256 aaPredicted RBP20.35■□□□□ 0.85
SHOX2-203ENST00000441443 BCL2A1Q16548 175 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 TMTC4Q5T4D3 741 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 SPRED1Q7Z699 444 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 ZDHHC17Q8IUH5 632 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 CADM3Q8N126 398 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 PCYOX1LQ8NBM8 494 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 USP33Q8TEY7 942 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 C3orf30Q96M34 536 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 ALPK1Q96QP1 1244 aa20.35■□□□□ 0.85
SHOX2-203ENST00000441443 AQP12BA6NM10 295 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 KPNA4O00629 521 aaPredicted RBP20.34■□□□□ 0.85
SHOX2-203ENST00000441443 CXCL11O14625 94 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 SYNCRIPO60506 623 aaKnown RBP20.34■□□□□ 0.85
SHOX2-203ENST00000441443 ALDOCP09972 364 aaKnown RBP20.34■□□□□ 0.85
SHOX2-203ENST00000441443 TMBIM6P55061 237 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 FAM83EQ2M2I3 478 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 OTUD3Q5T2D3 398 aaPredicted RBP20.34■□□□□ 0.85
SHOX2-203ENST00000441443 CCDC80Q76M96 950 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 AQP12AQ8IXF9 295 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 PNPLA1Q8N8W4 532 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 MUS81Q96NY9 551 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 HERC2P3Q9BVR0 1158 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 PSME2Q9UL46 239 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 A0A0J9YYE9 177 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 MAGEB16A2A368 324 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 GNL1P36915 607 aaPredicted RBP20.34■□□□□ 0.85
SHOX2-203ENST00000441443 POU6F1Q14863 301 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 CCNYL2Q5T2Q4 361 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 C6orf183Q5T699 404 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 TBPL2Q6SJ96 375 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 CYHR1Q6ZMK1 362 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 ARL10Q8N8L6 244 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 ABHD11Q8NFV4 315 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 KIF12Q96FN5 646 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 MYRFLQ96LU7 910 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 MRPL57Q9BQC6 102 aaKnown RBP20.34■□□□□ 0.85
SHOX2-203ENST00000441443 CMTM6Q9NX76 183 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 GIT1Q9Y2X7 761 aa20.34■□□□□ 0.85
SHOX2-203ENST00000441443 ARPC2O15144 300 aa20.33■□□□□ 0.85
SHOX2-203ENST00000441443 GAS2O43903 313 aaKnown RBP20.33■□□□□ 0.85
SHOX2-203ENST00000441443 ERCC2P18074 760 aa20.33■□□□□ 0.85
SHOX2-203ENST00000441443 NPY2RP49146 381 aa20.33■□□□□ 0.85
SHOX2-203ENST00000441443 ATP6V0D1P61421 351 aa20.33■□□□□ 0.85
SHOX2-203ENST00000441443 OXA1LQ15070 435 aa20.33■□□□□ 0.85
SHOX2-203ENST00000441443 STRADAQ7RTN6 431 aa20.33■□□□□ 0.85
SHOX2-203ENST00000441443 TRIM15Q9C019 465 aa20.33■□□□□ 0.85
SHOX2-203ENST00000441443 RAD21L1Q9H4I0 556 aa20.33■□□□□ 0.85
SHOX2-203ENST00000441443 ASB7Q9H672 318 aa20.33■□□□□ 0.85
SHOX2-203ENST00000441443 VPS51Q9UID3 782 aa20.33■□□□□ 0.85
SHOX2-203ENST00000441443 PTGDR2Q9Y5Y4 395 aa20.33■□□□□ 0.85
SHOX2-203ENST00000441443 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.33■□□□□ 0.84
SHOX2-203ENST00000441443 CPNE6O95741 557 aa20.33■□□□□ 0.84
SHOX2-203ENST00000441443 MBL2P11226 248 aaPredicted RBP20.33■□□□□ 0.84
SHOX2-203ENST00000441443 EEF1DP29692 281 aaKnown RBP20.33■□□□□ 0.84
SHOX2-203ENST00000441443 RAD23AP54725 363 aa20.33■□□□□ 0.84
SHOX2-203ENST00000441443 SNX16P57768 344 aa20.33■□□□□ 0.84
SHOX2-203ENST00000441443 STX1BP61266 288 aa20.33■□□□□ 0.84
SHOX2-203ENST00000441443 FRG1Q14331 258 aaKnown RBP20.33■□□□□ 0.84
SHOX2-203ENST00000441443 C9orf131Q5VYM1 1079 aa20.33■□□□□ 0.84
SHOX2-203ENST00000441443 COLGALT2Q8IYK4 626 aa20.33■□□□□ 0.84
SHOX2-203ENST00000441443 BEGAINQ9BUH8 593 aa20.33■□□□□ 0.84
SHOX2-203ENST00000441443 CDHR5Q9HBB8 845 aa20.33■□□□□ 0.84
SHOX2-203ENST00000441443 WARS2Q9UGM6 360 aaKnown RBP20.33■□□□□ 0.84
SHOX2-203ENST00000441443 B3GNT3Q9Y2A9 372 aa20.33■□□□□ 0.84
SHOX2-203ENST00000441443 A8MT66 165 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 TOR1BO14657 336 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 AURKAO14965 403 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 MATKP42679 507 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 SPCS2Q15005 226 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 PAFAH1B3Q15102 231 aaKnown RBP20.32■□□□□ 0.84
SHOX2-203ENST00000441443 IRAK1BP1Q5VVH5 260 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 ZNF773Q6PK81 442 aa20.32■□□□□ 0.84
SHOX2-203ENST00000441443 AFAP1L2Q8N4X5 818 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms